# Generated by roxygen2: do not edit by hand

S3method("scCol<-",Seurat)
S3method("scCol<-",SingleCellExperiment)
S3method("scCol<-",default)
S3method(dimredNames,Seurat)
S3method(dimredNames,SingleCellExperiment)
S3method(dimredNames,default)
S3method(metadataDF,Seurat)
S3method(metadataDF,SingleCellExperiment)
S3method(metadataDF,default)
S3method(scCol,Seurat)
S3method(scCol,SingleCellExperiment)
S3method(scCol,default)
S3method(scDimredMat,Seurat)
S3method(scDimredMat,SingleCellExperiment)
S3method(scDimredMat,default)
S3method(scExpMat,Seurat)
S3method(scExpMat,SingleCellExperiment)
S3method(scExpMat,default)
S3method(scExpMat,dgCMatrix)
S3method(scExpMat,matrix)
S3method(scGeneExp,Seurat)
S3method(scGeneExp,SingleCellExperiment)
S3method(scGeneExp,default)
S3method(scGeneExp,dgCMatrix)
S3method(scGeneExp,matrix)
export("scCol<-")
export(dimPlot)
export(dimredNames)
export(featurePlot)
export(metadataDF)
export(metadataNames)
export(scCol)
export(scColCounts)
export(scColPairCounts)
export(scColPairPercs)
export(scDimredMat)
export(scExpMat)
export(scGeneExp)
export(scPCAMat)
export(scUMAPMat)
export(violinPlot)
importFrom(S4Vectors,DataFrame)
importFrom(SeuratObject,Embeddings)
importFrom(SeuratObject,LayerData)
importFrom(SeuratObject,Layers)
importFrom(SeuratObject,Reductions)
importFrom(SingleCellExperiment,reducedDim)
importFrom(SingleCellExperiment,reducedDims)
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,assayNames)
importFrom(SummarizedExperiment,colData)
importFrom(dplyr,count)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_jitter)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_violin)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_gradientn)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_classic)
importFrom(henna,centerTitle)
importFrom(methods,is)
importFrom(paletteer,paletteer_c)
importFrom(paletteer,paletteer_d)
importFrom(rlang,.data)
importFrom(stats,setNames)
