Type: Package
Package: SMAD
Title: Statistical Modelling of AP-MS Data (SMAD)
Version: 1.27.11
Authors@R: 
    person("Qingzhou", "Zhang", , "zqzneptune@hotmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-9540-2624"))
Description: Assigning probability scores to protein interactions captured
    in affinity purification mass spectrometry (AP-MS) expriments to infer
    protein-protein interactions. The output would facilitate non-specific
    background removal as contaminants are commonly found in AP-MS data.
License: MIT + file LICENSE
URL: https://github.com/zqzneptune/SMAD
BugReports: https://github.com/zqzneptune/SMAD/issues
Depends: R (>= 4.5.0)
Imports: data.table, dplyr, magrittr (>= 1.5), Rcpp (>= 1.0.0),
        RcppAlgos, stats, tidyr, utils
Suggests: BiocStyle, knitr, rmarkdown, testthat
LinkingTo: Rcpp
VignetteBuilder: knitr
biocViews: MassSpectrometry, Proteomics, Software
Encoding: UTF-8
RoxygenNote: 7.3.3
git_url: https://git.bioconductor.org/packages/SMAD
git_branch: devel
git_last_commit: bc9620e
git_last_commit_date: 2026-04-23
Repository: Bioconductor 3.23
Date/Publication: 2026-04-23
NeedsCompilation: yes
Packaged: 2026-04-24 00:21:18 UTC; biocbuild
Author: Qingzhou Zhang [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-9540-2624>)
Maintainer: Qingzhou Zhang <zqzneptune@hotmail.com>
