Deterministic Multithreaded Genomic Interval Operations

Documentation for package ‘fastRanges’ version 0.99.2

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fast_anti_overlap_join	Anti Overlap Join
fast_build_index	Build a Reusable Subject Index
fast_cluster_overlaps	Cluster Overlapping Ranges
fast_count_overlaps	Count Overlaps
fast_count_overlaps_by_group	Count Overlaps by Subject Group
fast_coverage	Coverage Across Ranges
fast_default_threads	Default Thread Count
fast_disjoin	Disjoin Ranges
fast_distance_to_nearest	Distance to Nearest Subject Range
fast_find_overlaps	Find Overlaps with Deterministic Multithreading
fast_find_overlaps_iter	Create an Overlap Iterator
fast_follow	Follow Query Ranges
fast_gaps	Gaps Between Ranges
fast_index_stats	Index Summary Statistics
fast_inner_overlap_join	Inner Overlap Join
fast_iter_collect	Collect All Iterator Chunks
fast_iter_has_next	Check if an Iterator Has Remaining Chunks
fast_iter_next	Advance an Overlap Iterator
fast_iter_reset	Reset an Overlap Iterator
fast_left_overlap_join	Left Overlap Join
fast_load_index	Load a Reusable Subject Index
fast_nearest	Nearest Subject Range per Query
fast_overlaps_any	Overlap Existence per Query
fast_overlap_aggregate	Aggregate Subject Metadata Over Overlaps
fast_overlap_join	Join Ranges by Overlap
fast_precede	Precede Query Ranges
fast_ranges_example	Example Genomic Ranges for Documentation, Tests, and Tutorials
fast_range_intersect	Intersection of Two Range Sets
fast_range_setdiff	Set Difference of Two Range Sets
fast_range_union	Union of Two Range Sets
fast_reduce	Reduce Overlapping Ranges
fast_save_index	Save a Reusable Subject Index
fast_self_overlaps	Self Overlaps
fast_semi_overlap_join	Semi Overlap Join
fast_tile_coverage	Tile-Based Coverage Summary
fast_window_count_overlaps	Windowed Overlap Counts