90d165144031aeee1bb11206fa7090e4 *DESCRIPTION
27b80f7f7185212dc706b536da0f13b5 *INDEX
717715d1286e67672631f75c69c46c29 *Meta/Rd.rds
50a9fa3e1aa2c47fa7bdbd6e6bb8974e *Meta/features.rds
398b9b7b7b25c26ab9c429975fa96898 *Meta/hsearch.rds
334aa555e5d2521cdabe3574f735a8b5 *Meta/links.rds
6f099f343bfe261ead0247535a6af599 *Meta/nsInfo.rds
439ac83cbe7dfc20d5dc7b8f17402b99 *Meta/package.rds
dabc48de8b47adb5672ea6c1430b0e18 *Meta/vignette.rds
52f972c78a629224e10d57bb41aa9ce4 *NAMESPACE
d6c68f1fe41ced6e98a766a3757313da *R/SplicingGraphs
d21dd91605b591057bf8197be221561b *R/SplicingGraphs.rdb
19ca54c87800bcad02f93bc78f2812da *R/SplicingGraphs.rdx
4d2f483dcb6c71456f80e8aff6960e91 *README.md
a9f78dd6bd4cc9a8bf581f49dc636f7e *doc/SplicingGraphs.R
806e7451dd7bfcd4ce34bdb551578ce7 *doc/SplicingGraphs.Rnw
56775d366783f8aa295fd7205fe48682 *doc/SplicingGraphs.pdf
daa3ea54458c685af878308cd883728a *doc/index.html
e927d6e86c26ef2f567f538e4d02c6bb *extdata/ASpatterns.txt
ba72b09fd823dec580f1ee5eb2fd6a39 *extdata/TSPCsg.rda
2496dff4893d460511d871a0c485aa6b *extdata/toy_genes.gff3
648ca39416010bda3340da48c26912ef *extdata/toy_overlaps.txt
62072a44e72d0ea965e19a12820417ca *extdata/toy_reads.sam
7984da9d28475cb7344769657b934d02 *help/AnIndex
1e9fc994c650e05f5482bb04625e407d *help/SplicingGraphs.rdb
364be47f42498c06990035562fdc1811 *help/SplicingGraphs.rdx
470d87f6636401cf7dbdcbc24c0e01a3 *help/aliases.rds
7d235353a4cfd045a9aaafdcb1b87659 *help/paths.rds
8b9e04392705c5f49c1d429900587ff6 *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
34234e7c550cf53650d973cb48dee466 *scripts/TSPC-utils.R
c7dc703596188e9ad57c63b174c23ee3 *scripts/create-vignette-plots.R
44830c9a0141fe8277304d7419d7a20d *scripts/makeTSPCsg.R
9d4c8d07718b4c1cf96e0c344ddf363e *unitTests/test_countReads-methods.R
