SEMPLR-package	SEMplR-package
convertSEMsToPPMs	convertSEMsToPPMs
enrichmentSets	enrichmentSets
enrichSEMs	enrichSEMs
getBaseline	getBaseline
getBaseline,SNPEffectMatrix-method	getBaseline
getRanges	getRanges
getRanges,SEMScores-method	getRanges
getRangeSeqs	getRangeSeqs
getSEM	getSEM
getSEM,SNPEffectMatrix-method	getSEM
getSEMId	getSEMId
getSEMId,SNPEffectMatrix-method	getSEMId
getSEMs	getSEMs
getSEMs,SNPEffectMatrixCollection-method	getSEMs
loadSEMCollection	loadSEMCollection
plotEnrich	plotEnrich
plotSEM	plotSEM
plotSEMMotifs	plotSEMMotifs
plotSEMVariants	plotSEMVariants
scoreBinding	scoreBinding
scores	scores
scores,SEMScores-method	scores
scoreVariants	scoreVariants
SEMC	SEMC
semData	semData
semData,SEMScores-method	semData
semData,SNPEffectMatrixCollection-method	semData
SEMPLR	SEMplR-package
SEMScores	SEMScores
SEMScores-class	SEMScores-class
show,SEMScores-method	show-SEMScores
show,SNPEffectMatrix-method	show-SNPEffectMatrix
show,SNPEffectMatrixCollection-method	show-SNPEffectMatrixCollection
SNPEffectMatrix	SNPEffectMatrix
SNPEffectMatrix-class	SNPEffectMatrix-class
SNPEffectMatrixCollection	SNPEffectMatrixCollection
SNPEffectMatrixCollection-class	SNPEffectMatrixCollection-class
