351b9a90b44f64bfa545b57e5842048d *CITATION
6efe586ee41a86aa24dcadc162ddfb1e *DESCRIPTION
7308a1429206a342e1b65ff495c0af54 *INDEX
1ebbd3e34237af26da5dc08a4e440464 *LICENSE
2441129a9ee0ccaf5ff542c75ef46040 *Meta/Rd.rds
50a9fa3e1aa2c47fa7bdbd6e6bb8974e *Meta/features.rds
20ff41b23d73cf316c8934de707e2269 *Meta/hsearch.rds
bf908a29cf9863bab6ac28bcaeaed791 *Meta/links.rds
8e404efcd541618387b48d9a458d8d24 *Meta/nsInfo.rds
ea05cdb468a46164a897cac8811cdbb7 *Meta/package.rds
0859703f87d5f5c5d45b784292e006c6 *Meta/vignette.rds
be790c9837b6ea66eb2dbe8427d36dcd *NAMESPACE
f9992c6ddef0e53c1c701ae88edc3015 *NEWS.md
d6c68f1fe41ced6e98a766a3757313da *R/CaMutQC
54b947c12ce5f6e210b92528fa838048 *R/CaMutQC.rdb
bed0181f1c2abcfd2fe4defbe4a82f01 *R/CaMutQC.rdx
6bcd70e1be0511504b48712757ae3cb3 *README.md
52d3d707e01677c646098fe03b1aee2b *doc/CaMutQC-manual.R
6574e47dd47f47d81b1b7ed00adc4ffc *doc/CaMutQC-manual.Rmd
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4d3191e8c5dd0b2a0414d58fa9411f6d *doc/index.html
2b97e6e5384eac0fa3720578ab047455 *extdata/Multi-caller/WES_EA_T_1.MuSE.vep.vcf
c936a8a6dcbb3b4864e33a1ab680f3b6 *extdata/Multi-caller/WES_EA_T_1_varscan_filter_snp.vep.vcf
05c161daeeb678baad2d9a40db1f7fe6 *extdata/PON_test.txt
eb300e4c8d3248b498178a12b649d971 *extdata/Panel_gene/FoundationOne_genelist.txt
60b10b65308b405a9843dbde6cf6a4a6 *extdata/Panel_gene/MSK-IMPACT_gene_v1_341.txt
5bda3dd3491c42fa57fe051764bfc743 *extdata/Panel_gene/MSK-IMPACT_gene_v2_410.txt
0baedbcaf32e14dfdbe37a2b9ec4d204 *extdata/Panel_gene/MSK-IMPACT_gene_v3_468.txt
f3c2d225a88ffee30e5d046a6ace0537 *extdata/Panel_gene/Pan-cancer_genelist.txt
4763020ae9fa5cc98fb85f1bf734c85a *extdata/TSGenelist.txt
798751f5d19b42d4dc257c25cc94287c *extdata/WES_EA_T_1_mutect2.vep.vcf
4a78b8891328edc07af1d359e8cbd6b8 *extdata/bed/panel_hg19/FlCDx-hg19.rds
b1abb8040d7fc7a7c7717cbeae7c938f *extdata/bed/panel_hg19/MSK_v1-hg19.rds
222c71146b1dd342505347c46181c71e *extdata/bed/panel_hg19/MSK_v2-hg19.rds
5eea686f98ca76e6a510063065e7bd86 *extdata/bed/panel_hg19/MSK_v3-hg19.rds
6c56b976d2b448a4f5b30efebb55c87c *extdata/bed/panel_hg19/Pan-cancer-hg19.rds
82d6eafa94270328eaed66c6ae7433ca *extdata/bed/panel_hg38/FlCDx-hg38.rds
de265ede6039b6fc7dec12d30d9e4576 *extdata/bed/panel_hg38/MSK_v1-hg38.rds
fbd7eb863b878204d894840b422d0d7b *extdata/bed/panel_hg38/MSK_v2-hg38.rds
4598c2e68e79bc2b75ab6d563d6b1db6 *extdata/bed/panel_hg38/MSK_v3-hg38.rds
e937513586e80ac25c4004c4f6d2c96b *extdata/bed/panel_hg38/Pan-cancer-hg38.rds
9f021b271be71d8f8929503b0e9a14f5 *extdata/clin.txt
38b44d8d745e11e4eb03f7fb72256d11 *extdata/noncoding.txt
d926371aadedb4d5723edef1f058596a *help/AnIndex
b20b9df168a08174ebf829e49404236d *help/CaMutQC.rdb
d34f8988993fcd7853b5066ecbf69854 *help/CaMutQC.rdx
dd32e4a9d66c88e6302f7cd4e3283353 *help/aliases.rds
524af17ee794c150221cd42f64ede23c *help/paths.rds
262447b333a49b58bf0c10358538b5df *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
6054c3efcb449301821c47aa4bbe58eb *rmd/CaMutQC-FilterReport.Rmd
fae17326cad977848b0eab3dbbe8147a *script/DATASETS
05c161daeeb678baad2d9a40db1f7fe6 *shiny/dom/PON_example.txt
798751f5d19b42d4dc257c25cc94287c *shiny/dom/example.vcf
a93a1cdae603f5fc53cf4fdaa45c4a99 *shiny/server.R
edc471f96756bd892c058a43f90bf63a *shiny/ui.R
642b496bf5ffbf98e5b3cf241f1df1ea *shiny/www/CaMutQC_logo.png
