Package: CyTOFpower
Type: Package
Title: Power analysis for CyTOF experiments
Version: 1.16.0
Authors@R: c(person("Anne-Maud", "Ferreira",
           email = "anne-maud.ferreira@stanford.edu",
           role = c("cre", "aut"),
           comment = c(ORCID = "0000-0002-4749-746X")),
    person("Catherine", "Blish",
            email = "cblish@stanford.edu",
            role = c("aut")),
    person("Susan", "Holmes",
            email = "sph@stanford.edu",
            role = c("aut")))
Description: This package is a tool to predict the power of CyTOF
        experiments in the context of differential state analyses. The
        package provides a shiny app with two options to predict the
        power of an experiment: i. generation of in-sicilico CyTOF
        data, using users input ii. browsing in a grid of parameters
        for which the power was already precomputed.
biocViews: FlowCytometry, SingleCell, CellBiology, StatisticalMethod,
        Software
License: LGPL-3
Encoding: UTF-8
Depends: R (>= 4.1)
Imports: CytoGLMM, diffcyt, DT, dplyr, ggplot2, magrittr, methods,
        rlang, stats, shiny, shinyFeedback, shinyjs, shinyMatrix,
        SummarizedExperiment, tibble, tidyr
RoxygenNote: 7.1.2
VignetteBuilder: knitr
Suggests: testthat (>= 3.0.0), BiocStyle, knitr
Config/testthat/edition: 3
Config/pak/sysreqs: cmake libfontconfig1-dev libfreetype6-dev
        libglpk-dev make libicu-dev libpng-dev libxml2-dev perl
        zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 15:13:08 UTC
RemoteUrl: https://github.com/bioc/CyTOFpower
RemoteRef: RELEASE_3_22
RemoteSha: 9cc6940abb8eba11a2f8eb5195b833be075b4368
NeedsCompilation: no
Packaged: 2025-11-11 13:52:37 UTC; root
Author: Anne-Maud Ferreira [cre, aut] (ORCID:
    <https://orcid.org/0000-0002-4749-746X>),
  Catherine Blish [aut],
  Susan Holmes [aut]
Maintainer: Anne-Maud Ferreira <anne-maud.ferreira@stanford.edu>
Built: R 4.5.2; ; 2025-11-11 13:59:16 UTC; windows
