| CNOlistPB | Toy data | 
| computeScoreDT | Compute the score of a model/data (time-course) set using a bitString to cut the model. | 
| convert2array | Converts the output of simulatorDT to a 3D array for other functions | 
| cutAndPlotResultsDT | Plot the results of a time-course optimization | 
| gaBinaryDT | Genetic algorithm for optimizing models using multiple time-points | 
| getFitDT | The optimization function that finds the scaling factor for the boolean simulation | 
| modelPB | modelPB | 
| simulatorDT | Discrete time simulation of a boolean model |