ArrayExpress

Access the ArrayExpress Microarray Database at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Bioconductor version: 2.7

Access the ArrayExpress Repository at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Author: Audrey Kauffmann

Maintainer: Audrey Kauffmann <akauffmann.bioinfo at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("ArrayExpress")

To cite this package in a publication, start R and enter:

    citation("ArrayExpress")

PDF	R Script	ArrayExpress: Import and convert ArrayExpress data sets into R object
PDF		Reference Manual

biocViews	Microarray, DataImport, OneChannel, TwoChannel
Depends	R (>= 2.9.0), Biobase(>= 2.4.0)
Imports	XML, affy, limma
Suggests	arrayQualityMetrics
System Requirements
License	Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me
Version	1.10.0
Since	Bioconductor 2.3 (R-2.8)

Common Bioconductor workflows include:

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