# parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data)

## Documentation for package ‘mzR’ version 1.8.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

mzR-package | parser for mzXML, mzData and mzML files (mass spectrometry data)
analyzer | Access the metadata from an 'mzR' object.
analyzer-method | Class 'mzR' and sub-classes
class:mzR | Class 'mzR' and sub-classes
class:mzRnetCDF | Class 'mzR' and sub-classes
class:mzRramp | Class 'mzR' and sub-classes
close | Class 'mzR' and sub-classes
close-method | Class 'mzR' and sub-classes
detector | Access the metadata from an 'mzR' object.
detector-method | Class 'mzR' and sub-classes
fileName | Create and check mzR objects from netCDF, mzXML, mzData or mzML files.
fileName-method | Class 'mzR' and sub-classes
get3Dmap | Access the raw data from an 'mzR' object.
get3Dmap-method | Class 'mzR' and sub-classes
header | Access the raw data from an 'mzR' object.
header-method | Class 'mzR' and sub-classes
initializeRamp | Create and check mzR objects from netCDF, mzXML, mzData or mzML files.
initializeRamp-method | Class 'mzR' and sub-classes
instrumentInfo | Access the metadata from an 'mzR' object.
instrumentInfo-method | Class 'mzR' and sub-classes
ionisation | Access the metadata from an 'mzR' object.
ionisation-method | Class 'mzR' and sub-classes
isInitialized | Create and check mzR objects from netCDF, mzXML, mzData or mzML files.
isInitialized-method | Class 'mzR' and sub-classes
length | Class 'mzR' and sub-classes
length-method | Class 'mzR' and sub-classes
manufacturer | Access the metadata from an 'mzR' object.
manufacturer-method | Class 'mzR' and sub-classes
model | Access the metadata from an 'mzR' object.
model-method | Class 'mzR' and sub-classes
mzR | parser for mzXML, mzData and mzML files (mass spectrometry data)
mzR-class | Class 'mzR' and sub-classes
mzRnetCDF-class | Class 'mzR' and sub-classes
mzRramp-class | Class 'mzR' and sub-classes
openMSfile | Create and check mzR objects from netCDF, mzXML, mzData or mzML files.
peaks | Access the raw data from an 'mzR' object.
peaks-method | Class 'mzR' and sub-classes
peaksCount | Access the raw data from an 'mzR' object.
peaksCount-method | Class 'mzR' and sub-classes
runInfo | Access the metadata from an 'mzR' object.
runInfo-method | Class 'mzR' and sub-classes