graph

graph: A package to handle graph data structures

Bioconductor version: Release (2.7)

A package that implements some simple graph handling capabilities.

Author: R. Gentleman, Elizabeth Whalen, W. Huber, S. Falcon

Maintainer: Seth Falcon

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("graph")    

Documentation

PDF	R Script	Attributes for Graph Objects
PDF	R Script	clusterGraph and distGraph
PDF	R Script	Graph
PDF	R Script	Graph Design
PDF	R Script	graphBAM and MultiGraph classes

Reference Manual

Details

biocViews	GraphsAndNetworks
Depends	R, methods
Imports	methods, stats, tools, utils
Suggests	SparseM, XML, RBGL, RUnit
System Requirements
License	Artistic-2.0
URL
Depends On Me	BioMVCClass, BioNet, GOstats, GSEABase, GraphAT, KEGGgraph, RBGL, RBioinf, RCytoscape, RbcBook1, Rgraphviz, RpsiXML, Rredland, Rtreemix, SRAdb, apComplex, biocGraph, gage, gaggle, hyperdraw, hypergraph, keggorthology, maigesPack, nem, ontoTools, pathRender, pkgDepTools, topGO
Imports Me	CAMERA, Category, DEGraph, GOstats, GSEABase, GeneAnswers, GraphAT, HTSanalyzeR, KEGGgraph, PCpheno, Rgraphviz, Rtreemix, biocGraph, biocViews, flowCore, flowUtils, keggorthology, nem, pkgDepTools, ppiStats, qpgraph, rsbml, topGO
Suggests Me	BiocCaseStudies, Category, DEGraph, SPIA, ecolitk, qpgraph
Version	1.28.0

Package Downloads

Package Source	graph_1.28.0.tar.gz
Windows Binary	graph_1.28.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	graph_1.28.0.tgz
Package Downloads Report	Download Stats