yaqcaffy

Affymetrix expression data quality control and reproducibility analysis

Bioconductor version: Release (2.7)

Quality control of Affymetrix GeneChip expression data and reproducibility analysis of human whole genome chips with the MAQC reference datasets.

Author: Laurent Gatto

Maintainer: Laurent Gatto

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("yaqcaffy")    

Documentation

PDF

R Script

yaqcaffy: Affymetrix quality control and MAQC reproducibility

Reference Manual

Details

biocViews	Microarray, OneChannel, QualityControl, ReportWriting
Depends	simpleaffy, methods
Imports	simpleaffy, methods
Suggests	MAQCsubsetAFX, affydata, xtable, tcltk2, tcltk
System Requirements
License	Artistic-2.0
URL	http://sites.google.com/site/laurentgatto/r-bioconductor/yaqcaffy
Depends On Me
Imports Me
Suggests Me
Version	1.10.1

Package Downloads

Package Source	yaqcaffy_1.10.1.tar.gz
Windows Binary	yaqcaffy_1.10.1.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	yaqcaffy_1.10.1.tgz
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