############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data wiggleplotr ### ############################################################################## ############################################################################## * checking for file ‘wiggleplotr/DESCRIPTION’ ... OK * preparing ‘wiggleplotr’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘wiggleplotr.Rmd’ using rmarkdown Quitting from wiggleplotr.Rmd:17-28 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! package or namespace load failed for 'GenomicFeatures': class "Seqinfo" is not exported by 'namespace:GenomeInfoDb' --- Backtrace: ▆ 1. └─base::library("GenomicFeatures") 2. └─base::tryCatch(...) 3. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 4. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 5. └─value[[3L]](cond) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'wiggleplotr.Rmd' failed with diagnostics: package or namespace load failed for 'GenomicFeatures': class "Seqinfo" is not exported by 'namespace:GenomeInfoDb' --- failed re-building ‘wiggleplotr.Rmd’ SUMMARY: processing the following file failed: ‘wiggleplotr.Rmd’ Error: Vignette re-building failed. Execution halted