############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data rfaRm ### ############################################################################## ############################################################################## * checking for file ‘rfaRm/DESCRIPTION’ ... OK * preparing ‘rfaRm’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘rfaRm.Rmd’ using rmarkdown 2025-11-27 23:50:14.886 R[74872:60207280] XType: com.apple.fonts is not accessible. 2025-11-27 23:50:14.886 R[74872:60207280] XType: XTFontStaticRegistry is enabled. Quitting from rfaRm.Rmd:166-170 [unnamed-chunk-11] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `writeLines()`: ! can only write character objects --- Backtrace: ▆ 1. └─rfaRm::rfamSeedAlignment(...) 2. └─base::writeLines(alignment, con = filename) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'rfaRm.Rmd' failed with diagnostics: can only write character objects --- failed re-building ‘rfaRm.Rmd’ SUMMARY: processing the following file failed: ‘rfaRm.Rmd’ Error: Vignette re-building failed. Execution halted