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###
### Running command:
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###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 metaseqR2
###
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* checking for file ‘metaseqR2/DESCRIPTION’ ... OK
* preparing ‘metaseqR2’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘metaseqr2-annotation.Rmd’ using rmarkdown
--- finished re-building ‘metaseqr2-annotation.Rmd’

--- re-building ‘metaseqr2-statistics.Rmd’ using rmarkdown
  adding: tmp/Rtmp95R6q8/test1/plots/qc/correlation_correlogram.png (deflated 1%)
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  adding: tmp/Rtmp95R6q8/test1/plots/normalization/boxplot_normalized.png (deflated 17%)
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  adding: tmp/Rtmp95R6q8/test1/plots/normalization/gcbias_normalized.png (deflated 13%)
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  adding: tmp/Rtmp95R6q8/test1/plots/normalization/meandiff_raw_e14.5_e14.5_1_e14.5_2.png (deflated 3%)
  adding: tmp/Rtmp95R6q8/test1/plots/normalization/meanvar_normalized.png (deflated 6%)
  adding: tmp/Rtmp95R6q8/test1/plots/normalization/meanvar_raw.png (deflated 5%)
  adding: tmp/Rtmp95R6q8/test1/plots/statistics/de_heatmap_adult_8_weeks_vs_e14.5_asis.png (deflated 6%)
  adding: tmp/Rtmp95R6q8/test1/plots/statistics/de_heatmap_adult_8_weeks_vs_e14.5_zscore.png (deflated 5%)
  adding: tmp/Rtmp95R6q8/test1/plots/statistics/mastat_plot_adult_8_weeks_vs_e14.5.png (deflated 5%)
  adding: tmp/Rtmp95R6q8/test1/plots/statistics/volcano_plot_adult_8_weeks_vs_e14.5.png (deflated 7%)
  adding: tmp/Rtmp95R6q8/test1/plots/qc/correlation_correlogram.pdf (deflated 4%)
  adding: tmp/Rtmp95R6q8/test1/plots/qc/correlation_heatmap.pdf (deflated 26%)
  adding: tmp/Rtmp95R6q8/test1/plots/qc/correlation_pairs.pdf (deflated 4%)
  adding: tmp/Rtmp95R6q8/test1/plots/qc/filtered_genes.pdf (deflated 7%)
  adding: tmp/Rtmp95R6q8/test1/plots/qc/mds.pdf (deflated 12%)
  adding: tmp/Rtmp95R6q8/test1/plots/normalization/boxplot_normalized.pdf (deflated 12%)
  adding: tmp/Rtmp95R6q8/test1/plots/normalization/boxplot_raw.pdf (deflated 12%)
  adding: tmp/Rtmp95R6q8/test1/plots/normalization/gcbias_normalized.pdf (deflated 4%)
  adding: tmp/Rtmp95R6q8/test1/plots/normalization/gcbias_raw.pdf (deflated 4%)
  adding: tmp/Rtmp95R6q8/test1/plots/normalization/lengthbias_normalized.pdf (deflated 1%)
  adding: tmp/Rtmp95R6q8/test1/plots/normalization/lengthbias_raw.pdf (deflated 1%)
  adding: tmp/Rtmp95R6q8/test1/plots/normalization/meandiff_normalized_adult_8_weeks_a8w_1_a8w_2.pdf (deflated 21%)
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  adding: tmp/Rtmp95R6q8/test1/plots/normalization/meanvar_normalized.pdf (deflated 44%)
  adding: tmp/Rtmp95R6q8/test1/plots/normalization/meanvar_raw.pdf (deflated 39%)
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  adding: tmp/Rtmp95R6q8/test1/plots/statistics/mastat_plot_adult_8_weeks_vs_e14.5.pdf (deflated 5%)
  adding: tmp/Rtmp95R6q8/test1/plots/statistics/volcano_plot_adult_8_weeks_vs_e14.5.pdf (deflated 2%)
trying URL 'https://raw.github.com/HubSpot/pace/v1.0.0/pace.min.js'
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  adding: tmp/Rtmp95R6q8/test2/plots/qc/correlation_correlogram.png (deflated 1%)
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  adding: tmp/Rtmp95R6q8/test2/plots/statistics/mastat_plot_adult_8_weeks_vs_e14.5.png (deflated 5%)
  adding: tmp/Rtmp95R6q8/test2/plots/statistics/volcano_plot_adult_8_weeks_vs_e14.5.png (deflated 13%)
  adding: tmp/Rtmp95R6q8/test2/plots/qc/correlation_correlogram.pdf (deflated 4%)
  adding: tmp/Rtmp95R6q8/test2/plots/qc/correlation_heatmap.pdf (deflated 26%)
  adding: tmp/Rtmp95R6q8/test2/plots/qc/correlation_pairs.pdf (deflated 4%)
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  adding: tmp/Rtmp95R6q8/test2/plots/normalization/boxplot_normalized.pdf (deflated 8%)
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  adding: tmp/Rtmp95R6q8/test2/plots/statistics/de_heatmap_adult_8_weeks_vs_e14.5_asis.pdf (deflated 10%)
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Quitting from metaseqr2-statistics.Rmd:437-446 [example-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
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Error: processing vignette 'metaseqr2-statistics.Rmd' failed with diagnostics:
HTTP 500 Internal Server Error.
--- failed re-building ‘metaseqr2-statistics.Rmd’

SUMMARY: processing the following file failed:
  ‘metaseqr2-statistics.Rmd’

Error: Vignette re-building failed.
Execution halted