############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data igblastr ### ############################################################################## ############################################################################## * checking for file ‘igblastr/DESCRIPTION’ ... OK * preparing ‘igblastr’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘igblastr_overview.Rmd’ using rmarkdown Quitting from igblastr_overview.Rmd:112-115 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `.stop_on_existing_igblast_root()`: ! LATEST IgBLAST is already installed in /Users/biocbuild/Library/Caches/org.R-project.R/R/igblastr/igblast_roots/1.22.0/ Call 'set_igblast_root("1.22.0")' to use this installation (see '?set_igblast_root' for the details), or use 'force=TRUE' to reinstall. --- Backtrace: ▆ 1. └─igblastr::install_igblast() 2. └─igblastr:::.stop_on_existing_igblast_root(release, proj_igblast_root) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'igblastr_overview.Rmd' failed with diagnostics: LATEST IgBLAST is already installed in /Users/biocbuild/Library/Caches/org.R-project.R/R/igblastr/igblast_roots/1.22.0/ Call 'set_igblast_root("1.22.0")' to use this installation (see '?set_igblast_root' for the details), or use 'force=TRUE' to reinstall. --- failed re-building ‘igblastr_overview.Rmd’ SUMMARY: processing the following file failed: ‘igblastr_overview.Rmd’ Error: Vignette re-building failed. Execution halted