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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data EWCE
###
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* checking for file ‘EWCE/DESCRIPTION’ ... OK
* preparing ‘EWCE’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘EWCE.Rmd’ using rmarkdown
2025-11-25 00:18:21.220 R[33136:72596546] XType: Using static font registry.

-- mouse

-- human
--- finished re-building ‘EWCE.Rmd’

--- re-building ‘extended.Rmd’ using rmarkdown

-- mouse

-- human

-- mouse

-- human

Quitting from extended.Rmd:245-256 [unnamed-chunk-8]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! transfer closed with 8349634 bytes remaining to read
---
Backtrace:
    ▆
 1. ├─EWCE::bootstrap_enrichment_test(...)
 2. │ └─EWCE:::prepare_genesize_control_network(...)
 3. │   ├─dplyr::rename(...)
 4. │   └─orthogene::all_genes(...)
 5. │     └─orthogene:::all_genes_gprofiler(...)
 6. │       └─gprofiler2::gconvert(...)
 7. │         └─gprofiler2::gprofiler_request(url, body)
 8. │           └─RCurl::curlPerform(...)
 9. └─RCurl (local) `<fn>`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'extended.Rmd' failed with diagnostics:
transfer closed with 8349634 bytes remaining to read
--- failed re-building ‘extended.Rmd’

SUMMARY: processing the following file failed:
  ‘extended.Rmd’

Error: Vignette re-building failed.
Execution halted