############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data flowWorkspace ### ############################################################################## ############################################################################## * checking for file ‘flowWorkspace/DESCRIPTION’ ... OK * preparing ‘flowWorkspace’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘HowToMergeGatingSet.Rmd’ using rmarkdown --- finished re-building ‘HowToMergeGatingSet.Rmd’ --- re-building ‘flowWorkspace-Introduction.Rmd’ using rmarkdown Quitting from flowWorkspace-Introduction.Rmd:90-93 [autoplot-nodeName] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `add_ggcyto()`: ! object '+.gg' not found --- Backtrace: ▆ 1. ├─ggplot2::autoplot(gs, node) 2. └─ggcyto:::autoplot.GatingSet(gs, node) 3. ├─ggcyto::ggcyto(object, mapping, ...) 4. └─ggcyto:::ggcyto.GatingSet(object, mapping, ...) 5. └─ggcyto:::ggcyto.flowSet(data = data, mapping = mapping, ...) 6. ├─p + ggcyto_par_default() 7. └─p + ggcyto_par_default() 8. └─ggcyto:::add_ggcyto(e1, e2, e2name) 9. ├─e1 + e2.new 10. └─e1 + e2.new 11. └─ggcyto:::add_ggcyto(e1, e2, e2name) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'flowWorkspace-Introduction.Rmd' failed with diagnostics: object '+.gg' not found --- failed re-building ‘flowWorkspace-Introduction.Rmd’ SUMMARY: processing the following file failed: ‘flowWorkspace-Introduction.Rmd’ Error: Vignette re-building failed. Execution halted