############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rsamtools ### ############################################################################## ############################################################################## * checking for file ‘Rsamtools/DESCRIPTION’ ... OK cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bam_sort.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bambuffer.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bamfile.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bcffile.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bedidx.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/encode.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/fafile.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/idxstats.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/io_sam.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/pbuffer_wrapper.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/pileup.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/pileupbam.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/sam_opts.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/sam_utils.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/samtools_patch.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/scan_bam_data.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/tabixfile.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/tagfilter.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/utilities.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/zip_compression.o': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/Rsamtools.so': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/BamFileIterator.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/BamIterator.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/BamRangeIterator.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/Biostrings_stubs.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/COMPAT_bcf_hdr_read.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/COMPAT_bcf_hdr_read.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/GenomicPosition.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/IRanges_stubs.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/Makevars': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/PileupBuffer.cpp': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/PileupBuffer.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/PileupBufferShim.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/PosCache.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/PosCacheColl.cpp': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/PosCacheColl.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/R_init_Rsamtools.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/ResultManager.cpp': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/ResultManager.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/S4Vectors_stubs.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/Template.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/XVector_stubs.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/as_bam.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/as_bam.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bam.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bam_data.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bam_data.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bam_mate_iter.cpp': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bam_mate_iter.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bam_plbuf.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bam_sort.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bambuffer.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bambuffer.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bamfile.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bamfile.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bcffile.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bcffile.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/bedidx.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/encode.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/encode.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/fafile.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/fafile.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/idxstats.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/idxstats.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/io_sam.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/io_sam.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/pbuffer_wrapper.cpp': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/pbuffer_wrapper.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/pileup.cpp': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/pileup.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/pileupbam.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/pileupbam.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/samtools_patch.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/samtools_patch.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/scan_bam_data.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/scan_bam_data.h': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/tabixfile.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/tagfilter.c': No space left on device cp: error writing '/tmp/RtmpiJHerK/Rbuild3f73837703d46d/Rsamtools/src/tagfilter.h': No space left on device ERROR copying to build directory failed