############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data multicrispr ### ############################################################################## ############################################################################## * checking for file ‘multicrispr/DESCRIPTION’ ... OK * preparing ‘multicrispr’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘crispr_grna_design.Rmd’ using rmarkdown Quitting from crispr_grna_design.Rmd:135-138 [unnamed-chunk-9] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `loadNamespace()`: ! there is no package called 'BSgenome.Mmusculus.UCSC.mm10' --- Backtrace: ▆ 1. └─base::loadNamespace(x) 2. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) 3. └─base (local) withOneRestart(expr, restarts[[1L]]) 4. └─base (local) doWithOneRestart(return(expr), restart) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'crispr_grna_design.Rmd' failed with diagnostics: there is no package called 'BSgenome.Mmusculus.UCSC.mm10' --- failed re-building ‘crispr_grna_design.Rmd’ --- re-building ‘genome_arithmetics.Rmd’ using rmarkdown --- finished re-building ‘genome_arithmetics.Rmd’ --- re-building ‘prime_editing.Rmd’ using rmarkdown --- finished re-building ‘prime_editing.Rmd’ SUMMARY: processing the following file failed: ‘crispr_grna_design.Rmd’ Error: Vignette re-building failed. Execution halted