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###
### Running command:
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###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 mitology
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* checking for file ‘mitology/DESCRIPTION’ ... OK
* preparing ‘mitology’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘mitology.Rmd’ using rmarkdown

Quitting from mitology.Rmd:135-139 [unnamed-chunk-11]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! <ggtree> object properties are invalid:
- @mapping must be <ggplot2::mapping>, not S3<data.frame>
---
Backtrace:
     ▆
  1. └─mitology::mitoTreeHeatmap(...)
  2.   └─S7:::Ops.S7_object(...)
  3.     ├─base::tryCatch(return(base_ops[[.Generic]](e1, e2)), S7_error_method_not_found = function(cnd) cnd)
  4.     │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
  5.     │   └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
  6.     │     └─base (local) doTryCatch(return(expr), name, parentenv, handler)
  7.     └─base_ops[[.Generic]](e1, e2)
  8.       ├─S7::S7_dispatch()
  9.       └─ggplot2 (local) `method(+, list(ggplot2::ggplot, class_any))`(...)
 10.         └─ggplot2:::add_ggplot(e1, e2, e2name)
 11.           ├─ggplot2::ggplot_add(object, p, objectname)
 12.           └─ggplot2:::ggplot_add.default(object, p, objectname)
 13.             └─ggplot2::update_ggplot(object = object, plot = plot, ...)
 14.               ├─S7::S7_dispatch()
 15.               └─ggplot2 (local) `method(update_ggplot, list(ggplot2::theme, ggplot2::ggplot))`(...)
 16.                 └─S7::set_props(plot, theme = add_theme(plot@theme, object))
 17.                   └─S7::`props<-`(`*tmp*`, value = list(...))
 18.                     └─S7::validate(object)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'mitology.Rmd' failed with diagnostics:
<ggtree> object properties are invalid:
- @mapping must be <ggplot2::mapping>, not S3<data.frame>
--- failed re-building ‘mitology.Rmd’

SUMMARY: processing the following file failed:
  ‘mitology.Rmd’

Error: Vignette re-building failed.
Execution halted