############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data goatea ### ############################################################################## ############################################################################## * checking for file ‘goatea/DESCRIPTION’ ... OK * preparing ‘goatea’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘goatea.Rmd’ using rmarkdown trying URL 'https://github.com/ftwkoopmans/goat/raw/main/analyses/goat_manuscript_datasets.rda' Content type 'application/octet-stream' length 1074180 bytes (1.0 MB) ================================================== downloaded 1.0 MB 2025-10-24 17:18:42.682 R[87378:635485961] XType: com.apple.fonts is not accessible. 2025-10-24 17:18:42.683 R[87378:635485961] XType: XTFontStaticRegistry is enabled. Warning: ggrepel: 2228 unlabeled data points (too many overlaps). Consider increasing max.overlaps Quitting from goatea.Rmd:321-331 [tree plot] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'goatea.Rmd' failed with diagnostics: Can't convert a call to a string. --- failed re-building ‘goatea.Rmd’ SUMMARY: processing the following file failed: ‘goatea.Rmd’ Error: Vignette re-building failed. Execution halted