############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data gDRimport ### ############################################################################## ############################################################################## * checking for file ‘gDRimport/DESCRIPTION’ ... OK * preparing ‘gDRimport’: * checking DESCRIPTION meta-information ... OK * installing the package (it is needed to build vignettes) * creating vignettes ... ERROR --- re-building ‘ConvertingMAEtoPharmacoSet.Rmd’ using rmarkdown --- finished re-building ‘ConvertingMAEtoPharmacoSet.Rmd’ --- re-building ‘ConvertingPharmacoSetToGDR.Rmd’ using rmarkdown Quitting from ConvertingPharmacoSetToGDR.Rmd:46-59 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'ConvertingPharmacoSetToGDR.Rmd' failed with diagnostics: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct. ℹ Please use `with_mocked_bindings()` instead. --- failed re-building ‘ConvertingPharmacoSetToGDR.Rmd’ --- re-building ‘gDRimport.Rmd’ using rmarkdown --- finished re-building ‘gDRimport.Rmd’ SUMMARY: processing the following file failed: ‘ConvertingPharmacoSetToGDR.Rmd’ Error: Vignette re-building failed. Execution halted