############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL RbowtieCuda ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘RbowtieCuda’ ... ** this is package ‘RbowtieCuda’ version ‘0.99.0’ ** using staged installation ** libs cd "../src/nvbio/build" && rm -f CMakeCache.txt && cmake .. -- The C compiler identification is GNU 13.3.0 -- The CXX compiler identification is GNU 13.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Error at /usr/share/cmake-3.28/Modules/FindCUDAToolkit.cmake:855 (message): Could not find nvcc, please set CUDAToolkit_ROOT. Call Stack (most recent call first): CMakeLists.txt:11 (find_package) -- Configuring incomplete, errors occurred! make: *** [Makefile:10: all] Error 1 ERROR: compilation failed for package ‘RbowtieCuda’ * removing ‘/home/biocbuild/bbs-3.22-bioc/R/site-library/RbowtieCuda’