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### Running command:
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###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 RbowtieCuda
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* checking for file ‘RbowtieCuda/DESCRIPTION’ ... OK
* preparing ‘RbowtieCuda’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘RbowtieCuda’ ...
** this is package ‘RbowtieCuda’ version ‘0.99.0’
** using staged installation
** libs
cd "../src/nvbio/build" && rm -f CMakeCache.txt && cmake ..
-- The C compiler identification is GNU 13.3.0
-- The CXX compiler identification is GNU 13.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Error at /usr/share/cmake-3.28/Modules/FindCUDAToolkit.cmake:855 (message):
  Could not find nvcc, please set CUDAToolkit_ROOT.
Call Stack (most recent call first):
  CMakeLists.txt:11 (find_package)


-- Configuring incomplete, errors occurred!
make: *** [Makefile:10: all] Error 1
ERROR: compilation failed for package ‘RbowtieCuda’
* removing ‘/tmp/RtmpDfFtwc/Rinst22de991e6764fb/RbowtieCuda’
      -----------------------------------
ERROR: package installation failed