############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 Maaslin2 ### ############################################################################## ############################################################################## * checking for file ‘Maaslin2/DESCRIPTION’ ... OK * preparing ‘Maaslin2’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘maaslin2.Rmd’ using rmarkdown Quitting from maaslin2.Rmd:183-195 [unnamed-chunk-2] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! object is invalid: - every label must be named. --- Backtrace: ▆ 1. └─Maaslin2::Maaslin2(...) 2. └─Maaslin2:::maaslin2_association_plots(...) 3. └─ggplot2::labs("") 4. └─ggplot2::class_labels(args) 5. └─S7::new_object(labels) 6. └─S7::validate(object, recursive = !parent_validated) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'maaslin2.Rmd' failed with diagnostics: object is invalid: - every label must be named. --- failed re-building ‘maaslin2.Rmd’ SUMMARY: processing the following file failed: ‘maaslin2.Rmd’ Error: Vignette re-building failed. Execution halted