############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 DELocal ### ############################################################################## ############################################################################## * checking for file ‘DELocal/DESCRIPTION’ ... OK * preparing ‘DELocal’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘DELocal.Rmd’ using rmarkdown Quitting from DELocal.Rmd:120-123 [unnamed-chunk-8] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `as.vector()`: ! cannot coerce type 'object' to vector of type 'character' --- Backtrace: ▆ 1. └─DELocal::plotNeighbourhood(...) 2. └─base::message(results$plot) 3. └─base::.makeMessage(..., domain = domain, appendLF = appendLF) 4. └─base::lapply(list(...), as.character) 5. ├─base (local) FUN(X[[i]], ...) 6. └─base::as.character.default(X[[i]], ...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'DELocal.Rmd' failed with diagnostics: cannot coerce type 'object' to vector of type 'character' --- failed re-building ‘DELocal.Rmd’ SUMMARY: processing the following file failed: ‘DELocal.Rmd’ Error: Vignette re-building failed. Execution halted