############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data CTdata ### ############################################################################## ############################################################################## * checking for file ‘CTdata/DESCRIPTION’ ... OK * preparing ‘CTdata’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘CTdata.Rmd’ using rmarkdown Quitting from CTdata.Rmd:78-80 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `value[[3L]]()`: ! failed to connect reason: Failed to perform HTTP request. Caused by error in `curl::curl_fetch_memory()`: ! SSL connect error [bioconductor.org]: Recv failure: Connection reset by peer Consider rerunning with 'localHub=TRUE' --- Backtrace: ▆ 1. └─ExperimentHub (local) GTEX_data() 2. └─ExperimentHub:::.get_ExperimentHub() 3. └─ExperimentHub::ExperimentHub() 4. └─AnnotationHub::.Hub(...) 5. └─base::tryCatch(...) 6. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 7. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 8. └─value[[3L]](cond) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'CTdata.Rmd' failed with diagnostics: failed to connect reason: Failed to perform HTTP request. Caused by error in `curl::curl_fetch_memory()`: ! SSL connect error [bioconductor.org]: Recv failure: Connection reset by peer Consider rerunning with 'localHub=TRUE' --- failed re-building ‘CTdata.Rmd’ SUMMARY: processing the following file failed: ‘CTdata.Rmd’ Error: Vignette re-building failed. Execution halted