############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TENxBrainData ### ############################################################################## ############################################################################## * checking for file ‘TENxBrainData/DESCRIPTION’ ... OK * preparing ‘TENxBrainData’: * checking DESCRIPTION meta-information ... OK * installing the package (it is needed to build vignettes) * creating vignettes ... ERROR --- re-building ‘TENxBrainData.Rmd’ using rmarkdown Quitting from TENxBrainData.Rmd:290-295 [unnamed-chunk-22] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `readRDS()`: ! error reading from connection --- Backtrace: ▆ 1. ├─AnnotationHub::query(hub, "TENxBrainData") 2. └─AnnotationHub::query(hub, "TENxBrainData") 3. └─AnnotationHub (local) .local(x, pattern, ...) 4. └─AnnotationHub:::.db_index_load(x) 5. └─base::readRDS(.db_index_file(x)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'TENxBrainData.Rmd' failed with diagnostics: error reading from connection --- failed re-building ‘TENxBrainData.Rmd’ SUMMARY: processing the following file failed: ‘TENxBrainData.Rmd’ Error: Vignette re-building failed. Execution halted