############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD INSTALL Rigraphlib ### ############################################################################## ############################################################################## * installing to library ‘/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/R/site-library’ * installing *source* package ‘Rigraphlib’ ... ** this is package ‘Rigraphlib’ version ‘1.3.2’ ** using staged installation -- Version number: 1.0.0 -- The C compiler identification is GNU 13.3.0 -- The CXX compiler identification is GNU 13.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test COMPILER_SUPPORTS_UNKNOWN_WARNING_OPTION_FLAG -- Performing Test COMPILER_SUPPORTS_UNKNOWN_WARNING_OPTION_FLAG - Failed -- Performing Test COMPILER_HAS_DEPRECATED_ENUMVAL_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ENUMVAL_ATTR - Success -- Thread-local storage: supported (__thread) -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found BLAS: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/R/lib/libRblas.so -- Found LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.12.0 -- Looking for strcasecmp -- Looking for strcasecmp - found -- Looking for strncasecmp -- Looking for strncasecmp - found -- Looking for _stricmp -- Looking for _stricmp - not found -- Looking for _strnicmp -- Looking for _strnicmp - not found -- Looking for strdup -- Looking for strdup - found -- Looking for strndup -- Looking for strndup - found -- Looking for include file xlocale.h -- Looking for include file xlocale.h - not found -- Looking for uselocale -- Looking for uselocale - found -- Looking for _configthreadlocale -- Looking for _configthreadlocale - not found -- Performing Test HAVE__UMUL128 -- Performing Test HAVE__UMUL128 - Failed -- Performing Test HAVE___UMULH -- Performing Test HAVE___UMULH - Failed -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for C++ include stddef.h -- Looking for C++ include stddef.h - found -- Check size of __uint128_t -- Check size of __uint128_t - done -- Performing Test HAVE__POPCNT64 -- Performing Test HAVE__POPCNT64 - Failed -- Performing Test HAVE__POPCNT -- Performing Test HAVE__POPCNT - Failed -- Performing Test HAVE__BITSCANFORWARD64 -- Performing Test HAVE__BITSCANFORWARD64 - Failed -- Performing Test HAVE__BITSCANFORWARD -- Performing Test HAVE__BITSCANFORWARD - Failed -- Performing Test HAVE__BITSCANREVERSE64 -- Performing Test HAVE__BITSCANREVERSE64 - Failed -- Performing Test HAVE__BITSCANREVERSE -- Performing Test HAVE__BITSCANREVERSE - Failed -- Performing Test HAVE_BUILTIN_OVERFLOW -- Performing Test HAVE_BUILTIN_OVERFLOW - Success -- Looking for _LIBCPP_VERSION -- Looking for _LIBCPP_VERSION - not found -- Looking for __GLIBCXX__ -- Looking for __GLIBCXX__ - found -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- -- -----[ Build configuration ]---- -- Version: 1.0.0 -- CMake build type: Release -- Library type: static -- igraph_int_t size: 64 bits -- -- ----------[ Features ]---------- -- GLPK for optimization: yes -- Reading GraphML files: yes -- Thread-local storage: yes -- Link-time optimization: no -- -- --------[ Dependencies ]-------- -- ARPACK: vendored -- BISON: no -- BLAS: yes -- FLEX: no -- GLPK: vendored -- GMP: vendored -- INFOMAP: vendored -- LAPACK: yes -- LibXml2: yes -- OpenMP: yes -- PLFIT: vendored -- -- -----------[ Testing ]---------- -- Diff tool: not found -- Sanitizers: none -- Code coverage: no -- Verify 'finally' stack: no -- -- --------[ Documentation ]------- -- HTML: no -- PDF: no -- INFO: no -- -- igraph configured successfully. -- -- Configuring done (4.2s) -- Generating done (0.1s) -- Build files have been written to: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/_build [ 0%] Building CXX object src/isomorphism/bliss/CMakeFiles/bliss.dir/defs.cc.o [ 0%] Building CXX object src/isomorphism/bliss/CMakeFiles/bliss.dir/graph.cc.o [ 1%] Building CXX 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vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_dfs.c.o [ 2%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_dmperm.c.o [ 2%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_droptol.c.o [ 3%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_dropzeros.c.o [ 3%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_dupl.c.o [ 3%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_entry.c.o [ 3%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_ereach.c.o [ 3%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_etree.c.o [ 3%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_fkeep.c.o [ 3%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_gaxpy.c.o [ 3%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_happly.c.o [ 3%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_house.c.o [ 4%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_ipvec.c.o [ 4%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_leaf.c.o [ 4%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_load.c.o [ 4%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_lsolve.c.o [ 4%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_ltsolve.c.o [ 4%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_lu.c.o [ 4%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_lusol.c.o [ 4%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_malloc.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/cs/cs_malloc.c: In function ‘cs_igraph_realloc’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/cs/cs_malloc.c:34:26: warning: pointer ‘p’ may be used after ‘realloc’ [-Wuse-after-free] 34 | return ((*ok) ? pnew : p) ; /* return original p if failure */ | ~~~~~~~~~~~~~~^~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/cs/cs_malloc.c:32:12: note: call to ‘realloc’ here 32 | pnew = realloc (p, CS_MAX (n,1) * size) ; /* realloc the block */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 5%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_maxtrans.c.o [ 5%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_multiply.c.o [ 5%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_norm.c.o [ 5%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_permute.c.o [ 5%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_pinv.c.o [ 5%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_post.c.o [ 5%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_pvec.c.o [ 5%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_qr.c.o [ 5%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_qrsol.c.o [ 7%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_randperm.c.o [ 7%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_reach.c.o [ 7%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_scatter.c.o [ 7%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_scc.c.o [ 7%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_schol.c.o [ 7%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_spsolve.c.o [ 7%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_sqr.c.o [ 7%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_symperm.c.o [ 7%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_tdfs.c.o [ 8%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_transpose.c.o [ 8%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_updown.c.o [ 8%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_usolve.c.o [ 8%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_util.c.o [ 8%] Building C object vendor/cs/CMakeFiles/cxsparse_vendored.dir/cs_utsolve.c.o [ 8%] Built target cxsparse_vendored [ 8%] Building C object vendor/f2c/CMakeFiles/arithchk.dir/arithchk.c.o [ 8%] Linking C executable arithchk [ 8%] Built target arithchk [ 8%] Generating arith.h for f2c... [ 8%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/abort_.c.o [ 8%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/dolio.c.o [ 8%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_sin.c.o [ 9%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/dummy.c.o [ 9%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/dtime_.c.o [ 9%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/iio.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/iio.c: In function ‘s_rsfi’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/iio.c:91:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 91 | if(n=c_si(a)) return(n); | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/iio.c: In function ‘s_wsfi’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/iio.c:123:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 123 | if(n=c_si(a)) return(n); | ^ [ 9%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_sinh.c.o [ 9%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/backspac.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/backspac.c: In function ‘f_back’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/backspac.c:47:17: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 47 | fread((char *)&n,sizeof(uiolen),1,f); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 9%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/due.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/due.c: In function ‘s_rdue’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/due.c:40:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 40 | if(n=c_due(a)) return(n); | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/due.c: In function ‘s_wdue’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/due.c:53:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 53 | if(n=c_due(a)) return(n); | ^ [ 9%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/ilnw.c.o [ 9%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_sqrt.c.o [ 9%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/c_abs.c.o [ 10%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/ef1asc_.c.o [ 10%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/inquire.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c: In function ‘f_inqu’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:67:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 67 | if(byfile && x != -1 || !byfile && p!=NULL) | ~~~~~~~^~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:66:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 66 | if(a->inex!=NULL) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:70:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 70 | if(a->inopen!=NULL) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:75:38: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 75 | if(byfile || p!=NULL && p->ufnm!=NULL) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:74:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 74 | if(a->innamed!=NULL) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:78:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 78 | if(a->inname!=NULL) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:83:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 83 | if(a->inacc!=NULL && p!=NULL && p->ufd!=NULL) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:87:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 87 | if(a->inseq!=NULL) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:91:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 91 | if(a->indir!=NULL) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:95:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 95 | if(a->infmt!=NULL) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:99:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 99 | if(a->inform!=NULL) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:103:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 103 | if(a->inunf) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/inquire.c:112:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 112 | if(a->inblank && p!=NULL && p->ufmt) | ^ [ 10%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_tan.c.o [ 10%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/c_cos.c.o [ 10%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/ef1cmc_.c.o [ 10%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/l_ge.c.o [ 10%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_tanh.c.o [ 10%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/c_div.c.o [ 11%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/endfile.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/endfile.c: In function ‘f_end’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/endfile.c:46:21: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 46 | if (tf = FOPEN(nbuf, f__w_mode[0])) | ^~ [ 11%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/l_gt.c.o [ 11%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/rdfmt.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rdfmt.c: In function ‘rd_Z’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rdfmt.c:39:23: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 39 | while(ch = *sc++) | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rdfmt.c:42:23: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 42 | while(ch = *sc++) | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rdfmt.c:71:16: warning: suggest parentheses around ‘+’ inside ‘>>’ [-Wparentheses] 71 | w2 = w1+1 >> 1; | ~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rdfmt.c:93:37: warning: suggest parentheses around ‘-’ inside ‘<<’ [-Wparentheses] 93 | *t = hex[*s0 & 0xff]-1 << 4 | hex[s0[1] & 0xff]-1; | ~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rdfmt.c:93:64: warning: suggest parentheses around arithmetic in operand of ‘|’ [-Wparentheses] 93 | *t = hex[*s0 & 0xff]-1 << 4 | hex[s0[1] & 0xff]-1; | ~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rdfmt.c: In function ‘rd_F’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rdfmt.c:261:17: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 261 | if (!w--) goto zero; GET(ch); } | ^~ In file included from /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rdfmt.c:15: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/fmt.h:89:16: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 89 | #define GET(x) if((x=(*f__getn)())<0) return(x) | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rdfmt.c:261:38: note: in expansion of macro ‘GET’ 261 | if (!w--) goto zero; GET(ch); } | ^~~ [ 11%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/c_exp.c.o [ 11%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/erf_.c.o [ 11%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/l_le.c.o [ 11%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/rewind.c.o [ 11%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/c_log.c.o [ 11%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/erfc_.c.o [ 12%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/l_lt.c.o [ 12%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/rsfe.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsfe.c: In function ‘s_rsfe’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsfe.c:67:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 67 | if(n=c_sfe(a)) return(n); | ^ [ 12%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/c_sin.c.o [ 12%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/err.c.o [ 12%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/lbitbits.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lbitbits.c: In function ‘lbit_cshift’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lbitbits.c:47:65: warning: suggest parentheses around ‘-’ inside ‘>>’ [-Wparentheses] 47 | return (integer)(x << b | x >> LONGBITS -b ); | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lbitbits.c:51:48: warning: suggest parentheses around ‘-’ inside ‘<<’ [-Wparentheses] 51 | return (integer)(x << LONGBITS - b | x >> b); | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lbitbits.c:60:61: warning: suggest parentheses around ‘-’ inside ‘>>’ [-Wparentheses] 60 | return (integer)(y | z & (x << b | x >> len - b)); | ~~~~^~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lbitbits.c:60:40: warning: suggest parentheses around arithmetic in operand of ‘|’ [-Wparentheses] 60 | return (integer)(y | z & (x << b | x >> len - b)); | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lbitbits.c:64:53: warning: suggest parentheses around ‘-’ inside ‘<<’ [-Wparentheses] 64 | return (integer)(y | z & (x >> b | x << len - b)); | ~~~~^~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lbitbits.c:64:32: warning: suggest parentheses around arithmetic in operand of ‘|’ [-Wparentheses] 64 | return (integer)(y | z & (x >> b | x << len - b)); | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/rsli.c.o [ 12%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/c_sqrt.c.o [ 12%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/etime_.c.o [ 12%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/lbitshft.c.o [ 14%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/rsne.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c: In function ‘hash’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:85:20: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 85 | for(x = 0; c = *s++; x = x & 0x4000 ? ((x << 1) & 0x7fff) + 1 : x << 1) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c: In function ‘mk_hashtab’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:106:28: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 106 | for(x = &nl_cache; y = *x; x0 = x, x = &y->next) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c: In function ‘nl_init’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:158:47: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 158 | for(s = "ABCDEFGHIJKLMNOPQRSTUVWXYZ"; c = *s++; ) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:164:32: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 164 | for(s = "0123456789_"; c = *s++; ) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c: In function ‘getname’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:187:15: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 187 | while(*s = Alphanum[GETC(ch) & 0xff]) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c: In function ‘getdimen’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:242:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 242 | if (k = getnum(chp, x1)) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:246:21: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 246 | if (k = getnum(chp, &x2)) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:250:29: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 250 | if (k = getnum(chp, &x3)) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c: In function ‘x_rsne’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:348:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 348 | if (ch = getname(buf,sizeof(buf))) | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:400:47: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 400 | if (ch <= ' ' && ch >= 0 || ch == ',') | ~~~~~~~~~~^~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:403:37: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 403 | if (ch = getname(buf,sizeof(buf))) | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:427:37: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 427 | if (k = getdimen(&ch, dn, (ftnlen)size, | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:444:29: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 444 | if (k = getdimen(&ch, dn, size, nomax, &b)) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:455:37: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 455 | if (k = getdimen(&ch, dn1, dn->delta**dims, | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:475:37: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 475 | if (k = getdimen(&ch, &substr, size, size, &b)) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:510:26: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 510 | else if (dims = v->dims) { | ^~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:530:29: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 530 | if (k = l_read(&no1, vaddr + iva, size, type)) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:540:45: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 540 | if (k = l_read(&no2, vaddr + iva, | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:548:28: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 548 | if (readall) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c: In function ‘s_rsne’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:602:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 602 | if(n = c_le(a)) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c: In function ‘mk_hashtab’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:111:19: warning: ‘x0’ may be used uninitialized [-Wmaybe-uninitialized] 111 | y = *x0; | ~~^~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:105:24: note: ‘x0’ was declared here 105 | hashtab **x, **x0, *y; | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c: In function ‘x_rsne’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:578:44: warning: ‘dn’ may be used uninitialized [-Wmaybe-uninitialized] 578 | for(dn1 = dn0; dn1 <= dn; dn1++) { | ~~~~^~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:310:16: note: ‘dn’ was declared here 310 | dimen *dn, *dn0, *dn1; | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:535:43: warning: ‘dn0’ may be used uninitialized [-Wmaybe-uninitialized] 535 | iva += dn0->delta; | ~~~^~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/rsne.c:310:21: note: ‘dn0’ was declared here 310 | dimen *dn, *dn0, *dn1; | ^~~ [ 14%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/cabs.c.o [ 14%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/exit_.c.o [ 14%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/lread.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c: In function ‘l_C’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:290:20: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 290 | if (rd_count(ch)) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:313:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 313 | if (ch = l_R(1,0)) | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:325:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 325 | if (ch = l_R(1,0)) | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c: In function ‘nmL_getc’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:352:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 352 | if (rv = *nmL_next++) | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c: In function ‘l_L’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:434:19: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 434 | if(GETC(ch)!='*') | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c: In function ‘l_read’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:105:19: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 105 | #define ERR(x) if(n=(x)) return(n) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:689:25: note: in expansion of macro ‘ERR’ 689 | ERR(l_R(0,1)); | ^~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:105:19: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 105 | #define ERR(x) if(n=(x)) return(n) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:694:25: note: in expansion of macro ‘ERR’ 694 | ERR(l_R(0,0)); | ^~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:105:19: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 105 | #define ERR(x) if(n=(x)) return(n) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:705:25: note: in expansion of macro ‘ERR’ 705 | ERR(l_C()); | ^~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:105:19: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 105 | #define ERR(x) if(n=(x)) return(n) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:710:25: note: in expansion of macro ‘ERR’ 710 | ERR(l_L()); | ^~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:105:19: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 105 | #define ERR(x) if(n=(x)) return(n) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:713:25: note: in expansion of macro ‘ERR’ 713 | ERR(l_CHAR()); | ^~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c: In function ‘s_rsle’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lread.c:786:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 786 | if(n=c_le(a)) return(n); | ^ [ 14%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/s_cat.c.o [ 14%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/close.c.o [ 14%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/f77_aloc.c.o [ 14%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/lwrite.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lwrite.c: In function ‘l_g’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lwrite.c:141:31: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 141 | while(b[0] = b[1]) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lwrite.c:166:57: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 166 | for(c1 = '.', c = 'E'; *b = c1; | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lwrite.c: In function ‘l_put’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/lwrite.c:190:15: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 190 | while(c = *s++) | ^ [ 14%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/s_cmp.c.o [ 15%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/ctype.c.o [ 15%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/f77vers.c.o [ 15%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/s_copy.c.o [ 15%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_abs.c.o [ 15%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/fmt.c.o [ 15%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/open.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/open.c: In function ‘f_open’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/open.c:246:21: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 246 | if (tf = FOPEN(buf,f__w_mode[0])) | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/open.c:256:21: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 256 | if (tf = FOPEN(buf, f__r_mode[ufmt])) | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/open.c:258:26: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 258 | else if (tf = FOPEN(buf, f__w_mode[ufmt])) { | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/open.c:270:11: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 270 | if(b->useek) | ^ [ 15%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/s_paus.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/s_paus.c:40:1: warning: ‘s_1paus’ defined but not used [-Wunused-function] 40 | s_1paus(FILE *fin) | ^~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/s_paus.c:30:1: warning: ‘waitpause’ defined but not used [-Wunused-function] 30 | waitpause(Sigarg) | ^~~~~~~~~ [ 15%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_acos.c.o [ 15%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/fmtlib.c.o [ 16%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/pow_ci.c.o [ 16%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/s_rnge.c.o [ 16%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_asin.c.o [ 16%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/ftell_.c.o [ 16%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/pow_dd.c.o [ 16%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/s_stop.c.o [ 16%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_atan.c.o [ 16%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/pow_di.c.o [ 17%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/sfe.c.o [ 17%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_atn2.c.o [ 17%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/getenv_.c.o [ 17%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/pow_hh.c.o [ 17%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/sig_die.c.o [ 17%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_cnjg.c.o [ 17%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/h_abs.c.o [ 17%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/pow_ii.c.o [ 17%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/signal_.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/signal_.c: In function ‘signal_’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/signal_.c:17:16: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 17 | return (ftnint)signal(sig, proc); | ^ [ 18%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_cos.c.o [ 18%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/h_dim.c.o [ 18%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/pow_ri.c.o [ 18%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/signbit.c.o [ 18%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_cosh.c.o [ 18%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/h_dnnt.c.o [ 18%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/pow_zi.c.o [ 18%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/sue.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/sue.c: In function ‘s_rsue’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/sue.c:38:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 38 | if(n=c_sue(a)) return(n); | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/sue.c: In function ‘s_wsue’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/sue.c:61:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 61 | if(n=c_sue(a)) return(n); | ^ [ 18%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_dim.c.o [ 20%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/h_indx.c.o [ 20%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/pow_zz.c.o [ 20%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/system_.c.o [ 20%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_exp.c.o [ 20%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/h_len.c.o [ 20%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_abs.c.o [ 20%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/typesize.c.o [ 20%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_imag.c.o [ 20%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/h_mod.c.o [ 21%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_acos.c.o [ 21%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/uio.c.o [ 21%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_int.c.o [ 21%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/h_nint.c.o [ 21%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_asin.c.o [ 21%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/uninit.c.o [ 21%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_lg10.c.o [ 21%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/h_sign.c.o [ 21%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_atan.c.o [ 22%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/util.c.o [ 22%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_log.c.o [ 22%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/hl_ge.c.o [ 22%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_atn2.c.o [ 22%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/wref.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wref.c: In function ‘wrt_E’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wref.c:140:45: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 140 | for(s -= 2, e1 = 2; s[0] = s[1]; s++) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wref.c: In function ‘wrt_F’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wref.c:236:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 236 | if (n = f__scale) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wref.c:236:12: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 236 | if (n = f__scale) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wref.c:286:15: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 286 | while(n = *b++) | ^ [ 22%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_mod.c.o [ 22%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/hl_gt.c.o [ 22%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_cnjg.c.o [ 23%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/wrtfmt.c.o [ 23%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_nint.c.o [ 23%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/hl_le.c.o [ 23%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_cos.c.o [ 23%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/wsfe.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wsfe.c: In function ‘s_wsfe’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wsfe.c:55:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 55 | if(n=c_sfe(a)) return(n); | ^ [ 23%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_prod.c.o [ 23%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/hl_lt.c.o [ 23%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_cosh.c.o [ 23%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/wsle.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wsle.c: In function ‘s_wsle’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wsle.c:17:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 17 | if(n=c_le(a)) return(n); | ^ [ 24%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_sign.c.o [ 24%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/i77vers.c.o [ 24%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_dim.c.o [ 24%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/wsne.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wsne.c: In function ‘s_wsne’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/wsne.c:17:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 17 | if(n=c_le(a)) | ^ [ 24%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_sin.c.o [ 24%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/i_abs.c.o [ 24%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_exp.c.o [ 24%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/xwsne.c.o [ 24%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_sinh.c.o [ 25%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/i_dim.c.o [ 25%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_imag.c.o [ 25%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/z_abs.c.o [ 25%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_sqrt.c.o [ 25%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/i_dnnt.c.o [ 25%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_int.c.o [ 25%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/z_cos.c.o [ 25%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_tan.c.o [ 25%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/i_indx.c.o [ 27%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_lg10.c.o [ 27%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/z_div.c.o [ 27%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/d_tanh.c.o [ 27%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/i_len.c.o [ 27%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_log.c.o [ 27%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/z_exp.c.o [ 27%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/derf_.c.o [ 27%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/i_mod.c.o [ 27%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_mod.c.o [ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/z_log.c.o [ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/derfc_.c.o [ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/i_nint.c.o [ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_nint.c.o [ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/z_sin.c.o [ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/dfe.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/dfe.c: In function ‘s_rdfe’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/dfe.c:104:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 104 | if(n=c_dfe(a))return(n); | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/dfe.c: In function ‘s_wdfe’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/f2c/dfe.c:126:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 126 | if(n=c_dfe(a)) return(n); | ^ [ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/i_sign.c.o [ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_sign.c.o [ 29%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/z_sqrt.c.o [ 29%] Built target f2c_vendored [ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_1.c.o [ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_2.c.o [ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_aat.c.o [ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_control.c.o [ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_defaults.c.o [ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_info.c.o [ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_order.c.o [ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_post_tree.c.o [ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_postorder.c.o [ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_preprocess.c.o [ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_valid.c.o [ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/advbas.c.o [ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/asnhall.c.o [ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/asnlp.c.o [ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/asnokalg.c.o [ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/ckasn.c.o [ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/ckcnf.c.o [ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/cplex.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/cplex.c: In function ‘scan_token’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/cplex.c:241:49: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 241 | else if (isalpha(csa->c) || csa->c != '.' && strchr(CHAR_SET, | ^ [ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/cpp.c.o [ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/cpxbas.c.o [ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/graph.c.o [ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/gridgen.c.o [ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/intfeas1.c.o [ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/maxffalg.c.o [ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/maxflp.c.o [ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/mcflp.c.o [ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/mcfokalg.c.o [ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/mcfrelax.c.o [ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/minisat1.c.o [ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/mpl.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mpl.c: In function ‘glp_mpl_postsolve’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mpl.c:227:14: warning: ‘prim’ may be used uninitialized [-Wmaybe-uninitialized] 227 | if (fabs(prim) < 1e-9) prim = 0.0; | ^~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mpl.c:194:14: note: ‘prim’ was declared here 194 | double prim, dual; | ^~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mpl.c:228:14: warning: ‘dual’ may be used uninitialized [-Wmaybe-uninitialized] 228 | if (fabs(dual) < 1e-9) dual = 0.0; | ^~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mpl.c:194:20: note: ‘dual’ was declared here 194 | double prim, dual; | ^~~~ In file included from /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mpl.c:22: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl.h:2567:26: warning: ‘stat’ may be used uninitialized [-Wmaybe-uninitialized] 2567 | #define mpl_put_row_soln _glp_mpl_put_row_soln /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mpl.c:229:10: note: in expansion of macro ‘mpl_put_row_soln’ 229 | mpl_put_row_soln(tran, i, stat, prim, dual); | ^~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mpl.c:193:23: note: ‘stat’ was declared here 193 | int i, j, m, n, stat, ret; | ^~~~ [ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/mps.c.o In file included from /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:22: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c: In function ‘read_bounds’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:866:23: warning: comparison between two arrays [-Warray-compare] 866 | xassert(type != type); | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/env/env.h:175:16: note: in definition of macro ‘xassert’ 175 | ((void)((expr) || (glp_assert_(#expr, IGRAPH_FILE_BASENAME, __LINE__), 1))) | ^~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:866:23: note: use ‘&type[0] != &type[0]’ to compare the addresses 866 | xassert(type != type); | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/env/env.h:175:16: note: in definition of macro ‘xassert’ 175 | ((void)((expr) || (glp_assert_(#expr, IGRAPH_FILE_BASENAME, __LINE__), 1))) | ^~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c: In function ‘row_name’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:1128:21: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1128 | csa->deck && strlen(csa->P->row[i]->name) > 8) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c: In function ‘col_name’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:1143:21: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1143 | csa->deck && strlen(csa->P->col[j]->name) > 8) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c: In function ‘read_field’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:271:32: warning: ‘beg’ may be used uninitialized [-Wmaybe-uninitialized] 271 | while (csa->recpos < beg) | ~~~~~~~~~~~~^~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:252:14: note: ‘beg’ was declared here 252 | int beg, end, pos; | ^~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:288:30: warning: ‘end’ may be used uninitialized [-Wmaybe-uninitialized] 288 | for (pos = beg; pos <= end; pos++) | ~~~~^~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:252:19: note: ‘end’ was declared here 252 | int beg, end, pos; | ^~~ In function ‘read_bounds’, inlined from ‘glp_read_mps’ at /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:986:10: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:868:14: warning: ‘lb’ may be used uninitialized [-Wmaybe-uninitialized] 868 | if (lb == -DBL_MAX && ub == +DBL_MAX) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c: In function ‘glp_read_mps’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:746:19: note: ‘lb’ was declared here 746 | double bnd, lb, ub; | ^~ In function ‘read_bounds’, inlined from ‘glp_read_mps’ at /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:986:10: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:868:32: warning: ‘ub’ may be used uninitialized [-Wmaybe-uninitialized] 868 | if (lb == -DBL_MAX && ub == +DBL_MAX) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c: In function ‘glp_read_mps’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:746:23: note: ‘ub’ was declared here 746 | double bnd, lb, ub; | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c: In function ‘glp_write_mps’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:1346:13: warning: ‘rhs’ may be used uninitialized [-Wmaybe-uninitialized] 1346 | if (rhs != 0.0) | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:1330:17: note: ‘rhs’ was declared here 1330 | double rhs; | ^~~ [ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/netgen.c.o [ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/npp.c.o [ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/pript.c.o [ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prmip.c.o [ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prob1.c.o [ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prob2.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c: In function ‘glp_get_row_lb’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:233:14: warning: ‘lb’ may be used uninitialized [-Wmaybe-uninitialized] 233 | return lb; | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:219:14: note: ‘lb’ was declared here 219 | { double lb; | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c: In function ‘glp_get_row_ub’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:266:14: warning: ‘ub’ may be used uninitialized [-Wmaybe-uninitialized] 266 | return ub; | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:252:14: note: ‘ub’ was declared here 252 | { double ub; | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c: In function ‘glp_get_col_lb’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:327:14: warning: ‘lb’ may be used uninitialized [-Wmaybe-uninitialized] 327 | return lb; | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:312:14: note: ‘lb’ was declared here 312 | { double lb; | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c: In function ‘glp_get_col_ub’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:361:14: warning: ‘ub’ may be used uninitialized [-Wmaybe-uninitialized] 361 | return ub; | ^~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:346:14: note: ‘ub’ was declared here 346 | { double ub; | ^~ [ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prob3.c.o [ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prob4.c.o [ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prob5.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob5.c: In function ‘glp_set_row_stat’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob5.c:70:31: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 70 | if (row->stat == GLP_BS && stat != GLP_BS || /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob5.c: In function ‘glp_set_col_stat’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prob5.c:124:31: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 124 | if (col->stat == GLP_BS && stat != GLP_BS || [ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prrngs.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prrngs.c: In function ‘glp_print_ranges’: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prrngs.c:112:24: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 112 | if (pass == 1 && k > m || pass == 2 && k <= m) | ~~~~~~~~~~^~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/prrngs.c:176:37: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 176 | else if (stat == GLP_NL && P->dir == GLP_MIN || [ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prsol.c.o [ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdasn.c.o [ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdcc.c.o [ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdcnf.c.o [ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdipt.c.o [ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdmaxf.c.o [ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdmcf.c.o [ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdmip.c.o [ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdprob.c.o [ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdsol.c.o /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/Rigraphlib/igraph/vendor/glpk/api/rdsol.c:221:1: fatal error: error writing to /tmp/ccj4n9vi.s: No space left on device 221 | } | ^ compilation terminated. make[2]: *** [vendor/glpk/CMakeFiles/glpk_vendored.dir/build.make:776: vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdsol.c.o] Error 1 make[1]: *** [CMakeFiles/Makefile2:455: vendor/glpk/CMakeFiles/glpk_vendored.dir/all] Error 2 make: *** [Makefile:136: all] Error 2 Error: failed to build the igraph library Execution halted ERROR: configuration failed for package ‘Rigraphlib’ * removing ‘/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/R/site-library/Rigraphlib’ * restoring previous ‘/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/R/site-library/Rigraphlib’