############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TFutils ### ############################################################################## ############################################################################## * checking for file ‘TFutils/DESCRIPTION’ ... OK * preparing ‘TFutils’: * checking DESCRIPTION meta-information ... OK * installing the package (it is needed to build vignettes) * creating vignettes ... ERROR --- re-building ‘TFutils.Rmd’ using rmarkdown [E::hts_itr_next] Failed to seek to offset 1283359314677: Illegal seek Quitting from TFutils.Rmd:297-304 [paraa] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `data.table::fread()`: ! Input is empty or only contains BOM or terminal control characters --- Backtrace: ▆ 1. ├─BiocGenerics::lapply(...) 2. └─base::lapply(...) 3. └─global FUN(X[[i]], ...) 4. └─global asdf(x[[1]][[1]]) 5. └─data.table::fread(paste0(x, collapse = "\n"), header = FALSE) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'TFutils.Rmd' failed with diagnostics: Input is empty or only contains BOM or terminal control characters --- failed re-building ‘TFutils.Rmd’ --- re-building ‘fimo16.Rmd’ using rmarkdown --- finished re-building ‘fimo16.Rmd’ SUMMARY: processing the following file failed: ‘TFutils.Rmd’ Error: Vignette re-building failed. Execution halted