############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 miQC ### ############################################################################## ############################################################################## * checking for file ‘miQC/DESCRIPTION’ ... OK * preparing ‘miQC’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘miQC.Rmd’ using rmarkdown Quitting from miQC.Rmd:251-254 [unnamed-chunk-17] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `$<-.data.frame`: ! replacement has 1 row, data has 0 --- Backtrace: ▆ 1. └─miQC::plotFiltering(...) 2. ├─base::`$<-`(`*tmp*`, "keep", value = ``) 3. └─base::`$<-.data.frame`(`*tmp*`, "keep", value = ``) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'miQC.Rmd' failed with diagnostics: replacement has 1 row, data has 0 --- failed re-building ‘miQC.Rmd’ SUMMARY: processing the following file failed: ‘miQC.Rmd’ Error: Vignette re-building failed. Execution halted