############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 mCSEA ### ############################################################################## ############################################################################## * checking for file ‘mCSEA/DESCRIPTION’ ... OK * preparing ‘mCSEA’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘mCSEA.Rmd’ using rmarkdown Quitting from mCSEA.Rmd:283-287 [unnamed-chunk-12] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! 'bandTable' is not an exported object from 'namespace:mCSEAdata' --- Backtrace: x 1. \-mCSEA::mCSEAPlot(...) 2. \-Gviz::IdeogramTrack(...) 3. \-methods::new(...) 4. +-methods::initialize(value, ...) 5. \-Gviz::initialize(value, ...) 6. \-Gviz (local) .local(.Object, ...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'mCSEA.Rmd' failed with diagnostics: 'bandTable' is not an exported object from 'namespace:mCSEAdata' --- failed re-building ‘mCSEA.Rmd’ SUMMARY: processing the following file failed: ‘mCSEA.Rmd’ Error: Vignette re-building failed. Execution halted