############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 goatea ### ############################################################################## ############################################################################## * checking for file ‘goatea/DESCRIPTION’ ... OK * preparing ‘goatea’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘goatea.Rmd’ using rmarkdown trying URL 'https://github.com/ftwkoopmans/goat/raw/main/analyses/goat_manuscript_datasets.rda' Content type 'application/octet-stream' length 1074180 bytes (1.0 MB) ================================================== downloaded 1.0 MB Warning: ggrepel: 2228 unlabeled data points (too many overlaps). Consider increasing max.overlaps Quitting from goatea.Rmd:321-331 [tree plot] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'goatea.Rmd' failed with diagnostics: Can't convert a call to a string. --- failed re-building ‘goatea.Rmd’ SUMMARY: processing the following file failed: ‘goatea.Rmd’ Error: Vignette re-building failed. Execution halted