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###
### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MSstatsBioNet
###
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* checking for file ‘MSstatsBioNet/DESCRIPTION’ ... OK
* preparing ‘MSstatsBioNet’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘MSstatsBioNet.Rmd’ using rmarkdown

Quitting from MSstatsBioNet.Rmd:108-116 [unnamed-chunk-7]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `curl::curl_fetch_memory()`:
! Could not resolve hostname [discovery.indra.bio]:
Could not resolve host: discovery.indra.bio
---
Backtrace:
    ▆
 1. ├─MSstatsBioNet::getSubnetworkFromIndra(...)
 2. │ └─MSstatsBioNet:::.callIndraCogexApi(input$HgncId, force_include_other)
 3. │   └─httr::POST(...)
 4. │     └─httr:::request_perform(req, hu$handle$handle)
 5. │       ├─httr:::request_fetch(req$output, req$url, handle)
 6. │       └─httr:::request_fetch.write_memory(req$output, req$url, handle)
 7. │         └─curl::curl_fetch_memory(url, handle = handle)
 8. └─curl:::raise_libcurl_error(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'MSstatsBioNet.Rmd' failed with diagnostics:
Could not resolve hostname [discovery.indra.bio]:
Could not resolve host: discovery.indra.bio
--- failed re-building ‘MSstatsBioNet.Rmd’

--- re-building ‘PTM-Analysis.Rmd’ using rmarkdown

Quitting from PTM-Analysis.Rmd:65-69 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `curl::curl_fetch_memory()`:
! Could not resolve hostname [discovery.indra.bio]:
Could not resolve host: discovery.indra.bio
---
Backtrace:
    ▆
 1. ├─MSstatsBioNet::getSubnetworkFromIndra(...)
 2. │ └─MSstatsBioNet:::.callIndraCogexApi(input$HgncId, force_include_other)
 3. │   └─httr::POST(...)
 4. │     └─httr:::request_perform(req, hu$handle$handle)
 5. │       ├─httr:::request_fetch(req$output, req$url, handle)
 6. │       └─httr:::request_fetch.write_memory(req$output, req$url, handle)
 7. │         └─curl::curl_fetch_memory(url, handle = handle)
 8. └─curl:::raise_libcurl_error(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'PTM-Analysis.Rmd' failed with diagnostics:
Could not resolve hostname [discovery.indra.bio]:
Could not resolve host: discovery.indra.bio
--- failed re-building ‘PTM-Analysis.Rmd’

SUMMARY: processing the following files failed:
  ‘MSstatsBioNet.Rmd’ ‘PTM-Analysis.Rmd’

Error: Vignette re-building failed.
Execution halted