############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ProteinGymR ### ############################################################################## ############################################################################## * checking for file ‘ProteinGymR/DESCRIPTION’ ... OK * preparing ‘ProteinGymR’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘data_import_and_representation.Rmd’ using rmarkdown --- finished re-building ‘data_import_and_representation.Rmd’ --- re-building ‘visualization_exploration.Rmd’ using rmarkdown Quitting from visualization_exploration.Rmd:82-89 [ACE default heatmap] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `make_col_fun_dms()`: ! Required package 'colorRamp2' not found. Use 'BiocManager::install("colorRamp2") to install it. --- Backtrace: ▆ 1. └─ProteinGymR::plot_dms_heatmap(...) 2. └─ProteinGymR:::make_col_fun_dms(reordered_matrix, color_scheme) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'visualization_exploration.Rmd' failed with diagnostics: Required package 'colorRamp2' not found. Use 'BiocManager::install("colorRamp2") to install it. --- failed re-building ‘visualization_exploration.Rmd’ SUMMARY: processing the following file failed: ‘visualization_exploration.Rmd’ Error: Vignette re-building failed. Execution halted