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###
### Running command:
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###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data scFeatures
###
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* checking for file ‘scFeatures/DESCRIPTION’ ... OK
* preparing ‘scFeatures’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘scFeatures_overview.Rmd’ using rmarkdown

Quitting from scFeatures_overview.Rmd:169-178 [unnamed-chunk-7]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `pm[[2]]`:
! subscript out of bounds
---
Backtrace:
     ▆
  1. └─scFeatures::run_association_study_report(scfeatures_result, output_folder)
  2.   ├─rmarkdown::render(...)
  3.   │ └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
  4.   │   └─knitr:::process_file(text, output)
  5.   │     ├─xfun:::handle_error(...)
  6.   │     ├─base::withCallingHandlers(...)
  7.   │     └─knitr:::process_group(group)
  8.   │       └─knitr:::call_block(x)
  9.   │         └─knitr:::block_exec(params)
 10.   │           └─knitr:::eng_r(options)
 11.   │             ├─knitr:::in_input_dir(...)
 12.   │             │ └─knitr:::in_dir(input_dir(), expr)
 13.   │             └─knitr (local) evaluate(...)
 14.   │               └─evaluate::evaluate(...)
 15.   │                 ├─base::withRestarts(...)
 16.   │                 │ └─base (local) withRestartList(expr, restarts)
 17.   │                 │   ├─base (local) withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]])
 18.   │                 │   │ └─base (local) doWithOneRestart(return(expr), restart)
 19.   │                 │   └─base (local) withRestartList(expr, restarts[-nr])
 20.   │                 │     └─base (local) withOneRestart(expr, restarts[[1L]])
 21.   │                 │       └─base (local) doWithOneRestart(return(expr), restart)
 22.   │                 ├─evaluate:::with_handlers(...)
 23.   │                 │ ├─base::eval(call)
 24.   │                 │ │ └─base::eval(call)
 25.   │                 │ └─base::withCallingHandlers(...)
 26.   │                 ├─base::withVisible(eval(expr, envir))
 27.   │                 └─base::eval(expr, envir)
 28.   │                   └─base::eval(expr, envir)
 29.   ├─plotly::ggplotly(p)
 30.   └─plotly:::ggplotly.ggplot(p)
 31.     └─plotly::gg2list(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'scFeatures_overview.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building ‘scFeatures_overview.Rmd’

SUMMARY: processing the following file failed:
  ‘scFeatures_overview.Rmd’

Error: Vignette re-building failed.
Execution halted