############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD INSTALL wppi ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.16-bioc/R/site-library’ * installing *source* package ‘wppi’ ... ** using staged installation ** R ** byte-compile and prepare package for lazy loading [2023-04-10 15:24:16] [INFO] [OmnipathR] Initialized cache: `/home/biocbuild/.cache/OmnipathR`. [2023-04-10 15:24:16] [TRACE] [OmnipathR] Running on a build server, wiping cache. [2023-04-10 15:24:16] [TRACE] [OmnipathR] Cache is at `/home/biocbuild/.cache/OmnipathR`. [2023-04-10 15:24:16] [TRACE] [OmnipathR] Contains 1 files. [2023-04-10 15:24:16] [TRACE] [OmnipathR] Cache is locked: FALSE. [2023-04-10 15:24:16] [SUCCESS] [OmnipathR] Removing all cache contents from `/home/biocbuild/.cache/OmnipathR`. [2023-04-10 15:24:16] [TRACE] [OmnipathR] Pandoc version: `2.7.3`. [2023-04-10 15:24:16] [TRACE] [OmnipathR] Cache locked: FALSE Note: wrong number of arguments to '/' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location [2023-04-10 15:24:19] [INFO] [OmnipathR] Initialized cache: `/home/biocbuild/.cache/OmnipathR`. [2023-04-10 15:24:19] [TRACE] [OmnipathR] Running on a build server, wiping cache. [2023-04-10 15:24:19] [TRACE] [OmnipathR] Cache is at `/home/biocbuild/.cache/OmnipathR`. [2023-04-10 15:24:19] [TRACE] [OmnipathR] Contains 1 files. [2023-04-10 15:24:19] [TRACE] [OmnipathR] Cache is locked: FALSE. [2023-04-10 15:24:19] [SUCCESS] [OmnipathR] Removing all cache contents from `/home/biocbuild/.cache/OmnipathR`. [2023-04-10 15:24:19] [TRACE] [OmnipathR] Pandoc version: `2.7.3`. [2023-04-10 15:24:19] [TRACE] [OmnipathR] Cache locked: FALSE ** testing if installed package can be loaded from final location [2023-04-10 15:24:22] [INFO] [OmnipathR] Initialized cache: `/home/biocbuild/.cache/OmnipathR`. [2023-04-10 15:24:22] [TRACE] [OmnipathR] Running on a build server, wiping cache. [2023-04-10 15:24:22] [TRACE] [OmnipathR] Cache is at `/home/biocbuild/.cache/OmnipathR`. [2023-04-10 15:24:22] [TRACE] [OmnipathR] Contains 1 files. [2023-04-10 15:24:22] [TRACE] [OmnipathR] Cache is locked: FALSE. [2023-04-10 15:24:22] [SUCCESS] [OmnipathR] Removing all cache contents from `/home/biocbuild/.cache/OmnipathR`. [2023-04-10 15:24:22] [TRACE] [OmnipathR] Pandoc version: `2.7.3`. [2023-04-10 15:24:22] [TRACE] [OmnipathR] Cache locked: FALSE ** testing if installed package keeps a record of temporary installation path * DONE (wppi)