Package: SingleCellExperiment
Version: 1.33.2
Date: 2026-04-24
Title: S4 Classes for Single Cell Data
Authors@R: c(
        person("Aaron", "Lun", role=c("aut", "cph"), email="infinite.monkeys.with.keyboards@gmail.com"),
        person("Davide","Risso", role=c("aut","cre", "cph"), email="risso.davide@gmail.com"),
        person("Keegan", "Korthauer", role="ctb"),
        person("Kevin", "Rue-Albrecht", role="ctb"),
        person("Luke", "Zappia", role = "ctb", comment = c(ORCID = "0000-0001-7744-8565", github = "lazappi")))
Depends: SummarizedExperiment
Imports: methods, utils, stats, S4Vectors, BiocGenerics, GenomicRanges,
        DelayedArray
Suggests: testthat, BiocStyle, knitr, rmarkdown, Matrix, scRNAseq (>=
        2.9.1), Rtsne
biocViews: ImmunoOncology, DataRepresentation, DataImport,
        Infrastructure, SingleCell
Description: Defines a S4 class for storing data from single-cell
        experiments. This includes specialized methods to store and
        retrieve spike-in information, dimensionality reduction
        coordinates and size factors for each cell, along with the
        usual metadata for genes and libraries.
License: GPL-3
VignetteBuilder: knitr
RoxygenNote: 7.3.3
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-03-24 05:12:41 UTC
RemoteUrl: https://github.com/bioc/SingleCellExperiment
RemoteRef: HEAD
RemoteSha: f781efae4ec160ff109f4b53b47d39e41469e536
NeedsCompilation: no
Packaged: 2026-03-25 06:06:53 UTC; root
Author: Aaron Lun [aut, cph],
  Davide Risso [aut, cre, cph],
  Keegan Korthauer [ctb],
  Kevin Rue-Albrecht [ctb],
  Luke Zappia [ctb] (ORCID: <https://orcid.org/0000-0001-7744-8565>,
    github: lazappi)
Maintainer: Davide Risso <risso.davide@gmail.com>
Built: R 4.6.0; ; 2026-03-25 06:14:13 UTC; windows
