# Generated by roxygen2: do not edit by hand

export(DifferentialRegulation)
export(DifferentialRegulation_bulk)
export(compute_PB_counts)
export(load_EC)
export(load_USA)
export(load_bulk_EC)
export(load_bulk_US)
export(plot_bulk_pi)
export(plot_bulk_traceplot)
export(plot_pi)
export(plot_traceplot)
importFrom(BANDITS,prior_precision)
importFrom(MASS,ginv)
importFrom(Matrix,Matrix)
importFrom(Matrix,colSums)
importFrom(Matrix,readMM)
importFrom(Matrix,rowSums)
importFrom(Matrix,t)
importFrom(Rcpp,evalCpp)
importFrom(SingleCellExperiment,SingleCellExperiment)
importFrom(SingleCellExperiment,colData)
importFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(SummarizedExperiment,assays)
importFrom(SummarizedExperiment,rowData)
importFrom(data.table,fread)
importFrom(data.table,last)
importFrom(doParallel,registerDoParallel)
importFrom(doParallel,stopImplicitCluster)
importFrom(doRNG,'%dorng%')
importFrom(foreach,'%dopar%')
importFrom(foreach,foreach)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_errorbar)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,position_dodge)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(ggplot2,ylim)
importFrom(gridExtra,grid.arrange)
importFrom(methods,is)
importFrom(parallel,clusterCall)
importFrom(parallel,makeCluster)
importFrom(parallel,parLapply)
importFrom(parallel,stopCluster)
importFrom(stats,ar)
importFrom(stats,cov)
importFrom(stats,density)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,p.adjust)
importFrom(stats,pchisq)
importFrom(stats,qnorm)
importFrom(stats,residuals)
importFrom(stats,sd)
importFrom(stats,var)
importFrom(stats,window)
importFrom(tximport,tximport)
useDynLib(DifferentialRegulation, .registration=TRUE)
