FHIR_ResourceTypes      FHIR Resource types recognized in package
FHIR_retention_schemas
                        collection of FHIR Resource components to be
                        retained
FHIRtabs                table app
add_procedures          update a fhir graph on patients and conditions
                        with procedures
allin                   collection of synthea FHIR documents ingested
available_retention_schemas
                        list available 'retention schemas'
build_proccond_igraph   build graph with patients, conditions and
                        procedures
display_proccond_igraph
                        make network visualization
freq_app                produce interactive tables with FHIR resources
                        from a list of ingested bundles
getHumanName            get human name from a BiocFHIR.Patient instance
make_condition_graph    create graph with links from patients to
                        conditions
make_test_json_set      produce 50 json FHIR files in a folder
print.BiocFHIR.FHIRgraph
                        show a combination of graph and patient
                        attributes
print.FHIR.bundle       print method
process_AllergyIntolerance
                        extract information from retained fields in
                        AllergyIntolerance component of FHIR Bundle,
                        produce simple data.frame
process_CarePlan        extract information from retained fields in
                        CarePlan component of FHIR Bundle, produce
                        simple data.frame
process_Claim           extract information from retained fields in
                        Claim component of FHIR Bundle, produce simple
                        data.frame
process_Condition       extract information from retained fields in
                        Condition component of FHIR Bundle, produce
                        simple data.frame
process_Encounter       extract information from retained fields in
                        Encounter component of FHIR Bundle, produce
                        simple data.frame
process_Immunization    extract information from retained fields in
                        Immunization component of FHIR Bundle, produce
                        simple data.frame
process_MedicationRequest
                        extract information from retained fields in
                        MedicationRequest component of FHIR Bundle,
                        produce simple data.frame
process_Observation     extract information from retained fields in
                        Observation component of FHIR Bundle, produce
                        simple data.frame
process_Patient         flatten information in Patient component of a
                        bundle to a one-line data.frame
process_Procedure       extract information from retained fields in
                        Procedure component of FHIR Bundle, produce
                        simple data.frame
process_fhir_bundle     process a bundle of FHIR R4 JSON
stack_fhir              convert data of a given FHIR type in a list of
                        bundles to a data.frame
summarise_bundles       produce tables summarizing FHIR data
summary_selections      vector of fields to be selected for
                        summarization
