Changes in version 2.0.0 (2025-06-02) o Update backend and CLI Changes in version 1.99.0 (2025-05-29) o Update backend and CLI. Preparing for major version upgrade Changes in version 1.13.30 (2025-05-18) o Update backend and CLI Changes in version 1.13.29 (2025-05-18) o Update backend and CLI Changes in version 1.13.27 (2025-05-17) o Update backend and CLI Changes in version 1.13.26 (2025-05-16) o Update backend and CLI Changes in version 1.13.25 (2025-05-16) o Update backend and CLI Changes in version 1.13.24 (2025-05-16) o Update backend and CLI Changes in version 1.13.23 (2025-05-16) o Update backend and CLI Changes in version 1.13.22 (2025-05-16) o Update backend and CLI Changes in version 1.13.21 (2025-05-16) o Update backend and CLI Changes in version 1.13.20 (2025-05-14) o Update backend and CLI Changes in version 1.13.19 (2025-05-14) o Update backend and CLI Changes in version 1.13.1 (2025-04-11) o Update backend and CLI Changes in version 1.7.3 (2024-04-07) o Preparing for next Bioconductor Release Changes in version 1.7.2 (2024-02-10) o Fix vignette bug Changes in version 1.7.1 (2024-02-10) o Update R version requirement Changes in version 1.5.2 (2023-08-24) o Update java backend to BioInfoJavaUtils-1.4.0 (haploid GT in vcf) Changes in version 1.5.1 (2023-04-30) o Update java backend to BioInfoJavaUtils-1.3.1 (fasta header name) Changes in version 1.1.6 (2022-09-26) o Update java backend to BioInfoJavaUtils-1.2.4 (revamped FastaManager) Changes in version 1.1.5 (2022-06-23) o Update vignette minor bug Changes in version 1.1.4 (2022-06-16) o Update vignette to handle getting sample files through https failure Changes in version 1.1.3 (2022-06-06) o Update vignette to handle getting sample files through https failure Changes in version 1.1.2 (2022-05-15) o Update possibly corrupted samples.vcf.gz Changes in version 1.1.1 (2022-05-08) o Update tests to improve coverage Changes in version 1.0.0 (2022-04-27) o Bioconductor 3.15 Release. New package fastreeR, Phylogenetic, Distance and Other Calculations on VCF and Fasta Files Changes in version 0.99.7 (2022-04-02) o Updates and corrections after the 1st Bioconductor review Changes in version 0.99.6 (2022-03-26) o Drop function dist2hist Changes in version 0.99.5 (2022-03-25) o Update vignette's use of dist2hist Changes in version 0.99.4 (2022-03-25) o Update java backend (createHistogram) Changes in version 0.99.3 (2022-03-25) o Update java backend Changes in version 0.99.2 (2022-03-25) o Update README.md to inform about JDK>=8 requirement o Update java dependencies (jfreechart-1.5.3) Changes in version 0.99.1 (2022-03-24) o Update vignette to use BiocFileCache so that sample vcf and fasta downloads not get repeated needlessly Changes in version 0.99.0 (2022-03-21) o Submitted to Bioconductor