Package: RNAmodR.RiboMethSeq
Type: Package
Title: Detection of 2'-O methylations by RiboMethSeq
Version: 1.25.0
Date: 2025-09-25
Authors@R: c(person("Felix G.M.", 
                    "Ernst", 
                    email = "felix.gm.ernst@outlook.com", 
                    role = c("aut", "cre"),
                    comment = c(ORCID = "0000-0001-5064-0928")),
             person("Denis L.J.", 
                    "Lafontaine", 
                    email = "denis.lafontaine@ulb.ac.be", 
                    role = c("ctb", "fnd")))
Description: RNAmodR.RiboMethSeq implements the detection of 2'-O
        methylations on RNA from experimental data generated with the
        RiboMethSeq protocol. The package builds on the core
        functionality of the RNAmodR package to detect specific
        patterns of the modifications in high throughput sequencing
        data.
biocViews: Software, WorkflowStep, Visualization, Sequencing
License: Artistic-2.0
Encoding: UTF-8
LazyData: false
Depends: R (>= 4.0), RNAmodR (>= 1.5.3)
Imports: methods, S4Vectors, BiocGenerics, IRanges, GenomicRanges, Gviz
Suggests: BiocStyle, knitr, rmarkdown, testthat, rtracklayer, Seqinfo,
        RNAmodR.Data
Collate: 'RNAmodR.RiboMethSeq.R' 'Modifier-RiboMethSeq-class.R'
        'Modifier-RiboMethSeq-viz.R'
VignetteBuilder: knitr
RoxygenNote: 7.3.3
BugReports: https://github.com/FelixErnst/RNAmodR.RiboMethSeq/issues
URL: https://github.com/FelixErnst/RNAmodR.RiboMethSeq
Config/pak/sysreqs: make libbz2-dev libicu-dev libjpeg-dev liblzma-dev
        libpng-dev libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:52:40 UTC
RemoteUrl: https://github.com/bioc/RNAmodR.RiboMethSeq
RemoteRef: HEAD
RemoteSha: ebb255c82d16b6de0012c0ebe231b8c687cd43c4
NeedsCompilation: no
Packaged: 2025-11-02 04:15:30 UTC; root
Author: Felix G.M. Ernst [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-5064-0928>),
  Denis L.J. Lafontaine [ctb, fnd]
Maintainer: Felix G.M. Ernst <felix.gm.ernst@outlook.com>
Built: R 4.6.0; ; 2025-11-02 04:24:15 UTC; windows
