| build.null.model | Applies linear of logistic regregression to the data. |
| covariates | This function performs an access to covariates |
| covariates-method | This function performs an access to covariates |
| geneTest | This function performs a gene-level test based on combined effect sizes. |
| geneTest-method | This function performs a gene-level test based on combined effect sizes. |
| geneTestMeta | This function performs a gene-level meta-analysis based on combined effect sizes. |
| geneTestMeta-method | This function performs a gene-level meta-analysis based on combined effect sizes. |
| geneTestOne | get.reg.family |
| genotype | This function performs an access to genotype. |
| genotype-method | This function performs an access to genotype. |
| get.a | Get a given STT |
| get.reg.family | get.reg.family |
| phenotype | This function performs an access to phenotype |
| phenotype-method | This function performs an access to phenotype |
| preprocess | Preprocess input data with Principal Component Analysis method (PCA) |
| preprocessLASSO | preprocessLASSO |
| preprocessPCA | preprocessPCA |
| preprocessPLS | preprocessPLS |
| preprocessRidge | preprocessLASSO |
| print.rqt | General functions of 'rqt' such as accessors and printing. |
| results | This function performs an access to covariates |
| results-method | This function performs an access to covariates |
| ridge_se | Importing required packages and functions |
| rqt | The rqt class constructor |
| rqt-class | The rqt class |
| rqt-general | General functions of 'rqt' such as accessors and printing. |
| show.rqt | General functions of 'rqt' such as accessors and printing. |
| simple.multvar.reg | Applies linear of logistic regregression to the data. |
| summary.rqt | General functions of 'rqt' such as accessors and printing. |
| vcov_ridge | vcov_ridge: returns variance-covariance matrix and standard deviation for ridge/LASSO regression object |