## ---- include = FALSE--------------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>", warning = FALSE, message = FALSE ) ## ---- eval = FALSE------------------------------------------------------------ # vignette("start-here", "spsurvey") ## ----------------------------------------------------------------------------- library(spsurvey) ## ----------------------------------------------------------------------------- NE_Lakes <- sp_frame(NE_Lakes) ## ----------------------------------------------------------------------------- summary(NE_Lakes, formula = ~ ELEV) ## ---- eval = FALSE------------------------------------------------------------ # plot(NE_Lakes, formula = ~ ELEV) ## ---- echo = FALSE------------------------------------------------------------ plot(NE_Lakes, formula = ~ ELEV, key.pos = 4) ## ----------------------------------------------------------------------------- summary(NE_Lakes, formula = ~ ELEV_CAT) ## ---- eval = FALSE------------------------------------------------------------ # plot(NE_Lakes, formula = ~ ELEV_CAT, key.width = lcm(3)) ## ---- echo = FALSE------------------------------------------------------------ plot(NE_Lakes, formula = ~ ELEV_CAT, key.width = lcm(3), key.pos = 4) ## ----------------------------------------------------------------------------- summary(NE_Lakes, formula = ~ ELEV_CAT + AREA_CAT) ## ---- eval = FALSE------------------------------------------------------------ # plot(NE_Lakes, formula = ~ ELEV_CAT + AREA_CAT, key.width = lcm(3)) ## ---- echo = FALSE------------------------------------------------------------ plot(NE_Lakes, formula = ~ ELEV_CAT + AREA_CAT, key.width = lcm(3), key.pos = 4) ## ----------------------------------------------------------------------------- summary(NE_Lakes, formula = ~ ELEV_CAT:AREA_CAT) ## ---- eval = FALSE------------------------------------------------------------ # plot(NE_Lakes, formula = ~ ELEV_CAT:AREA_CAT, key.width = lcm(3)) ## ---- echo = FALSE------------------------------------------------------------ plot(NE_Lakes, formula = ~ ELEV_CAT:AREA_CAT, key.width = lcm(3), key.pos = 4) ## ----------------------------------------------------------------------------- summary(NE_Lakes, formula = ELEV ~ AREA_CAT) ## ---- eval = FALSE------------------------------------------------------------ # plot(NE_Lakes, formula = ELEV ~ AREA_CAT) ## ---- echo = FALSE------------------------------------------------------------ plot(NE_Lakes, formula = ELEV ~ AREA_CAT, key.pos = 4) ## ----------------------------------------------------------------------------- summary(NE_Lakes, formula = ELEV ~ AREA_CAT, onlyshow = "small") ## ---- eval = FALSE------------------------------------------------------------ # plot(NE_Lakes, formula = ELEV ~ AREA_CAT, onlyshow = "small") ## ---- echo = FALSE------------------------------------------------------------ plot(NE_Lakes, formula = ELEV ~ AREA_CAT, onlyshow = "small", key.pos = 4) ## ----------------------------------------------------------------------------- summary(NE_Lakes, formula = ELEV_CAT ~ AREA_CAT) ## ---- eval = FALSE------------------------------------------------------------ # plot(NE_Lakes, formula = ELEV_CAT ~ AREA_CAT, key.width = lcm(3)) ## ---- echo = FALSE------------------------------------------------------------ plot(NE_Lakes, formula = ELEV_CAT ~ AREA_CAT, key.width = lcm(3), key.pos = 4) ## ---- eval = FALSE------------------------------------------------------------ # list1 <- list(main = "Elevation Categories", pal = rainbow) # list2 <- list(main = "Area Categories") # list3 <- list(levels = c("small", "large"), pch = c(4, 19)) # plot( # NE_Lakes, # formula = ~ ELEV_CAT + AREA_CAT, # var_args = list(ELEV_CAT = list1, AREA_CAT = list2), # varlevel_args = list(AREA_CAT = list3), # cex = 0.75, # key.width = lcm(3) # ) ## ---- echo = FALSE------------------------------------------------------------ list1 <- list(main = "Elevation Categories", pal = rainbow) list2 <- list(main = "Area Categories") list3 <- list(levels = c("small", "large"), pch = c(4, 19)) plot( NE_Lakes, formula = ~ ELEV_CAT + AREA_CAT, var_args = list(ELEV_CAT = list1, AREA_CAT = list2), varlevel_args = list(AREA_CAT = list3), cex = 0.75, key.width = lcm(3), key.pos = 4 ) ## ---- eval = FALSE------------------------------------------------------------ # sublist <- list(AREA_CAT = list3) # plot( # NE_Lakes, # formula = AREA_CAT ~ ELEV_CAT, # var_args = list(ELEV_CAT = sublist), # key.width = lcm(3) # ) ## ---- echo = FALSE------------------------------------------------------------ sublist <- list(AREA_CAT = list3) plot( NE_Lakes, formula = AREA_CAT ~ ELEV_CAT, var_args = list(ELEV_CAT = sublist), key.width = lcm(3), key.pos = 4 ) ## ----------------------------------------------------------------------------- set.seed(51) ## ----------------------------------------------------------------------------- eqprob_rho <- grts(NE_Lakes, n_base = 50, n_over = 10) ## ----------------------------------------------------------------------------- summary(eqprob_rho) ## ---- eval = FALSE------------------------------------------------------------ # plot(eqprob_rho, key.width = lcm(3)) ## ---- echo = FALSE------------------------------------------------------------ plot(eqprob_rho, key.width = lcm(3), key.pos = 4) ## ---- eval = FALSE------------------------------------------------------------ # plot(eqprob_rho, NE_Lakes, key.width = lcm(3)) ## ---- echo = FALSE------------------------------------------------------------ plot(eqprob_rho, NE_Lakes, key.width = lcm(3), key.pos = 4) ## ----------------------------------------------------------------------------- summary(eqprob_rho, formula = siteuse ~ AREA_CAT) ## ---- eval = FALSE------------------------------------------------------------ # plot(eqprob_rho, formula = siteuse ~ AREA_CAT, key.width = lcm(3)) ## ---- echo = FALSE------------------------------------------------------------ plot(eqprob_rho, formula = siteuse ~ AREA_CAT, key.width = lcm(3), key.pos = 4) ## ----------------------------------------------------------------------------- summary(eqprob_rho, formula = ELEV ~ siteuse) ## ---- eval = FALSE------------------------------------------------------------ # plot(eqprob_rho, formula = ELEV ~ siteuse) ## ---- echo = FALSE------------------------------------------------------------ plot(eqprob_rho, formula = ELEV ~ siteuse, key.pos = 4) ## ----------------------------------------------------------------------------- NLA_PNW <- sp_frame(NLA_PNW) ## ----------------------------------------------------------------------------- summary(NLA_PNW, formula = ~ NITR_COND) ## ---- eval = FALSE------------------------------------------------------------ # plot(NLA_PNW, formula = ~ NITR_COND, key.width = lcm(3)) ## ---- echo = FALSE------------------------------------------------------------ plot(NLA_PNW, formula = ~ NITR_COND, key.width = lcm(3), key.pos = 4) ## ----------------------------------------------------------------------------- summary(NLA_PNW, formula = NITR_COND ~ STATE) ## ---- eval = FALSE------------------------------------------------------------ # plot(NLA_PNW, formula = NITR_COND ~ STATE, key.width = lcm(3)) ## ---- echo = FALSE------------------------------------------------------------ plot(NLA_PNW, formula = NITR_COND ~ STATE, key.width = lcm(3), key.pos = 4)