Automated and Controlled Extraction, Cleaning, and Processing of Occurrence Data for Generating Biogeographic Ranges of Marine Organisms [R package EcoCleanR version 1.0.1]

EcoCleanR: Automated and Controlled Extraction, Cleaning, and Processing of Occurrence Data for Generating Biogeographic Ranges of Marine Organisms

Provides step-by-step automation for integrating biodiversity data from multiple online aggregators, merging and cleaning datasets while addressing challenges such as taxonomic inconsistencies, georeferencing issues, and spatial or environmental outliers. Includes functions to extract environmental data and to define the biogeographic ranges in which species are most likely to occur.

Version:	1.0.1
Depends:	R (≥ 3.5)
Imports:	dplyr, geodata, geosphere, ggplot2, mregions2, patchwork, rlang, sdmpredictors, sf, taxize, terra, tidyr
Suggests:	knitr, rgbif, robis, ridigbio, rmarkdown, testthat (≥ 3.0.0)
Published:	2025-11-19
DOI:	10.32614/CRAN.package.EcoCleanR (may not be active yet)
Author:	Priyanka Soni [aut, cre], Austin Hendy [aut], David Bottjer [aut], Vijay Barve [ctb]
Maintainer:	Priyanka Soni <sonip at usc.edu>
License:	MIT + file LICENSE
NeedsCompilation:	no
Citation:	EcoCleanR citation info
Materials:	README
CRAN checks:	EcoCleanR results

Documentation:

Reference manual:	EcoCleanR.html , EcoCleanR.pdf
Vignettes:	data_cleaning (source, R code) data_merging (source, R code)

Downloads:

Package source:	EcoCleanR_1.0.1.tar.gz
Windows binaries:	r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries:	r-release (arm64): EcoCleanR_1.0.1.tgz, r-oldrel (arm64): EcoCleanR_1.0.1.tgz, r-release (x86_64): EcoCleanR_1.0.1.tgz, r-oldrel (x86_64): EcoCleanR_1.0.1.tgz

Linking:

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