Last updated on 2025-08-01 10:51:07 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.12 | 247.84 | 261.96 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.53 | 231.63 | 242.16 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 224.00 | 245.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.84 | 266.70 | 280.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.10 | 257.90 | 272.00 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 161.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 205.00 | 225.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 159.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 281.00 | 305.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/112s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.455, system: 0.036, elapsed: 1.685 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.851, system: 0.122, elapsed: 11.217 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.014, elapsed: 0.260 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.773, system: 0.198, elapsed: 5.204 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.284 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.978, system: 0.394, elapsed: 19.362 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.485, system: 0.032, elapsed: 2.325 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.974, system: 0.072, elapsed: 13.337 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.385 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.752, system: 0.171, elapsed: 6.702 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.225 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.085, system: 0.308, elapsed: 23.831 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.034, elapsed: 2.390 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.039, system: 0.063, elapsed: 14.851 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.011, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.655, system: 0.181, elapsed: 6.315 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.273 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.151, system: 0.209, elapsed: 1.336 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.323, system: 0.525, elapsed: 26.516 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.498, system: 0.032, elapsed: 1.940 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.018, system: 0.079, elapsed: 12.516 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.013, elapsed: 0.289 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.739, system: 0.188, elapsed: 5.469 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.208 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.272, system: 0.472, elapsed: 14.227 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.530, system: 0.823, elapsed: 35.615 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/106s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.540, system: 0.046, elapsed: 1.936 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.899, system: 0.072, elapsed: 11.855 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.250 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.532, system: 0.185, elapsed: 5.261 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.255 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.843, system: 0.340, elapsed: 20.239 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.510, system: 0.027, elapsed: 2.456 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.958, system: 0.067, elapsed: 14.945 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.012, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.603, system: 0.159, elapsed: 5.416 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.297 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.963, system: 0.292, elapsed: 24.234 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.044, elapsed: 2.384 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.988, system: 0.068, elapsed: 12.351 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.234 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.428, system: 0.148, elapsed: 4.623 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.272 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.052, system: 0.208, elapsed: 0.946 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.042, system: 0.515, elapsed: 21.785 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.486, system: 0.027, elapsed: 2.136 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.938, system: 0.063, elapsed: 11.806 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.504, system: 0.174, elapsed: 4.646 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.007, elapsed: 0.234 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.082, system: 0.572, elapsed: 13.775 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.977, system: 0.883, elapsed: 33.710 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64