AlienGenome	AlienGenome
AlienRSList_broad	AlienRSList_broad
AlienRSList_narrow	AlienRSList_narrow
chooseHclustMet	chooseHclustMet
cleanCrosswiseMatrix	cleanCrosswiseMatrix
createUniverse	createUniverse
crosswiseMatrix	crosswiseMatrix
crosswisePermTest	crosswisePermTest
cw_Alien	cw_Alien
cw_Alien_RaR	cw_Alien_RaR
cw_Alien_ReG	cw_Alien_ReG
cw_Alien_ReG_no_Square	cw_Alien_ReG_no_Square
cw_Alien_ReR	cw_Alien_ReR
DFfromLZ	DFfromLZ
genoMatriXeR-class	genoMatriXeR-class
getHClust	getHClust
getMatrix	getMatrix
getMultiEvaluation	getMultiEvaluation
getParameters	getParameters
gMXR	genoMatriXeR-class
gmxrMatrix	gmxrMatrix
gmxrMatrix<-	gmxrMatrix-set
gmxrMultiOverlaps	gmxrMultiOverlaps
gmxrParam	gmxrParam
makeCrosswiseMatrix	makeCrosswiseMatrix
makeLZMatrix	makeLZMatrix
mLZS	multiLocalZScore-class
mlzsMatrix	mlzsMatrix
mlzsMatrix<-	mlzsMatrix-set
mlzsMultiLocalZscores	mlzsMultiLocalZscores
mlzsParam	mlzsParam
mlzsParam<-	mlzsParam-set
mLZ_regA_ReG	mLZ_regA_ReG
mLZ_regA_ReG_br	mLZ_regA_ReG_br
mLZ_regD_ReG	mLZ_regD_ReG
multiLocalZscore	multiLocalZscore
multiLocalZScore-class	multiLocalZScore-class
multiPermTest	multiPermTest
plotCrosswiseDimRed	plotCrosswiseDimRed
plotCrosswiseMatrix	plotCrosswiseMatrix
plotLocalZScoreMatrix	plotLocalZScoreMatrix
plotSingleLZ	plotSingleLZ
plotSinglePT	plotSinglePT
print,genoMatriXeR-method	print-genoMatriXeR-method
randomizeRegionsPerc	randomizeRegionsPerc
similarRegionSet	similarRegionSet
subList	subList
