PCCI                    PhyloTaxonomic Consistency Cophenetic Index
PMPG                    Percentage of Mono or Paraphyletic Groups
SWeeP                   Spaced Words Projection
SWeePlite               Spaced Words Projection lite
extractHDV              Function for obtaining the HDV (High
                        Dimensional Vector) matrix
orthBase                Generate a orthonormal matrix
rSWeeP-package          rSWeeP - Alignment-free method for vectorising
                        biological sequences
