adapt_interventions_to_cpp	createInterventions
adapt_rules_to_cpp	createUserVars
allFitnessEffects	allFitnessEffects
allMutatorEffects	allFitnessEffects
atex2b	vignette_pre_computed
atex4	vignette_pre_computed
atex5	vignette_pre_computed
benchmark_1	benchmarks
benchmark_1_0.05	benchmarks
benchmark_2	benchmarks
benchmark_3	benchmarks
check_acttion	createUserVars
check_double_id	createInterventions
check_double_rule_id	createUserVars
check_same_name	createUserVars
check_what_happens	createInterventions
createInterventions	createInterventions
createRules	createUserVars
createUserVars	createUserVars
diversityLOD	POM
diversityPOM	POM
evalAllGenotypes	evalAllGenotypes
evalAllGenotypesFitAndMut	evalAllGenotypes
evalAllGenotypesMut	evalAllGenotypes
evalGenotype	evalAllGenotypes
evalGenotypeFitAndMut	evalAllGenotypes
evalGenotypeMut	evalAllGenotypes
examplePosets	examplePosets
examplesFitnessEffects	examplesFitnessEffects
ex_missing_drivers_b11	example-missing-drivers
ex_missing_drivers_b12	example-missing-drivers
LOD	POM
LOD.oncosimul2	POM
LOD.oncosimulpop	POM
Magellan_stats	to_Magellan
mcfLs	mcfLs
oncoSimulIndiv	oncoSimulIndiv
oncoSimulPop	oncoSimulIndiv
oncoSimulSample	oncoSimulIndiv
OncoSimulWide2Long	OncoSimulWide2Long
osi	vignette_pre_computed
osi_with_ints	vignette_pre_computed
plot.evalAllGenotypes	plotFitnessLandscape
plot.evalAllGenotypesMut	plotFitnessLandscape
plot.fitnessEffects	plot.fitnessEffects
plot.genotype_fitness_matrix	plotFitnessLandscape
plot.oncosimul	plot.oncosimul
plot.oncosimulpop	plot.oncosimul
plotClonePhylog	plotClonePhylog
plotFitnessLandscape	plotFitnessLandscape
plotPoset	plotPoset
POM	POM
POM.oncosimul2	POM
POM.oncosimulpop	POM
poset	poset
print.oncosimul	oncoSimulIndiv
print.oncosimulpop	oncoSimulIndiv
print.sampledGenotypes	samplePop
rfitness	rfitness
sampledGenotypes	samplePop
samplePop	samplePop
simOGraph	simOGraph
simT2	vignette_pre_computed
simT3	vignette_pre_computed
simul_period_1	vignette_pre_computed
smyelo3v57	vignette_pre_computed
summary.oncosimul	oncoSimulIndiv
summary.oncosimulpop	oncoSimulIndiv
s_3_a	vignette_pre_computed
s_3_b	vignette_pre_computed
to_Magellan	to_Magellan
transform_intervention	createInterventions
transform_rule	createUserVars
uvex2	vignette_pre_computed
uvex3	vignette_pre_computed
verify_interventions	createInterventions
verify_rules	createUserVars
verify_user_vars	createUserVars
woAntibS	freq-dep-simul-examples
